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cnv_exp

Keith Ching
Attachments
EGFR.cnvexp.png (35978 bytes)
EGFR_LUAD.png (89688 bytes)

Look for CNV associated with a gene's expression level.

For each gene in the genome, samples are divided into two groups based on CNV status ( 0.75 cutoff, min 5 snp). A t-test is performed using the expression of the chosen gene vs. the two groups. Significant differences are reported.

Required:
Expression source
CNV source
HUGO symbol

Example Query

cnv_exp
cnv_exp_box


Related

Wiki: Instructions