From: SourceForge.net <no...@so...> - 2009-11-12 12:42:30
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Patches item #2896561, was opened at 2009-11-12 07:42 Message generated for change (Tracker Item Submitted) made by rajarshi You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=320024&aid=2896561&group_id=20024 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: Rajarshi Guha (rajarshi) Assigned to: Nobody/Anonymous (nobody) Summary: patch to fix UIT for single atom query Initial Comment: I've got a fix for bug 2888845 (https://sourceforge.net/tracker/?func=detail&aid=2888845&group_id=20024&atid=120024) that updates getIsomorphMaps to directly match single atom queries. The return value is the same as usual but in this case, RMap refers to atom indices rather than bond indices - thus there is no need to call makeAtomsMapsOfBondsMaps. However, in the interests of generality, makeAtomsMapsOfBondsMaps is also modified to account for single atom queries. Thus the return value is the appropriate atom-atom mapping (basically, just return the input mapping). This way code for multi-atom queries is the same as for single-atom queries. Unit tests and Javadocs are updated in the patch. Needs review. For cdk-1.2.x ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=320024&aid=2896561&group_id=20024 |