[Cdk-commits] SF.net SVN: cdk: [7633] trunk/cdk/src/org/openscience/cdk/qsar/descriptors/ molecular/ALOGP.java

[<eg...@us...>]

Revision: 7633
          http://svn.sourceforge.net/cdk/?rev=7633&view=rev
Author:   egonw
Date:     2007-01-04 09:06:31 -0800 (Thu, 04 Jan 2007)

Log Message:
-----------
Fixed method names (does no one have this in the build path??)

Modified Paths:
--------------
    trunk/cdk/src/org/openscience/cdk/qsar/descriptors/molecular/ALOGP.java

Modified: trunk/cdk/src/org/openscience/cdk/qsar/descriptors/molecular/ALOGP.java
===================================================================
--- trunk/cdk/src/org/openscience/cdk/qsar/descriptors/molecular/ALOGP.java	2007-01-04 16:45:32 UTC (rev 7632)
+++ trunk/cdk/src/org/openscience/cdk/qsar/descriptors/molecular/ALOGP.java	2007-01-04 17:06:31 UTC (rev 7633)
@@ -3,7 +3,7 @@
  * $Date: 2006-05-04 19:29:58 +0000 (Thu, 04 May 2006) $
  * $Revision: 6171 $
  *
- * Copyright (C) 2006  Todd Martin (Environmental Protection Agency)
+ * Copyright (C) 2006-2007  Todd Martin (Environmental Protection Agency)
  *
  * Contact: cdk...@li...
  *
@@ -999,7 +999,7 @@
 			// if (s.equals("F") || s.equals("O") || s.equals("Cl")
 			// || s.equals("Br") || s.equals("N") || s.equals("S"))
 
-			if (ap.GetNormalizedElectronegativity(((IAtom)ca.get(j)).getSymbol()) > 1) {
+			if (ap.getNormalizedElectronegativity(((IAtom)ca.get(j)).getSymbol()) > 1) {
 				java.util.List bonds2 = atomContainer.getConnectedBondsList(((IAtom)ca.get(j)));
 
 				boolean HaveDouble = false;
@@ -1401,7 +1401,7 @@
 			// if (s.equals("F") || s.equals("O") || s.equals("Cl")
 			// || s.equals("Br") || s.equals("N") || s.equals("S"))
 
-			if (ap.GetNormalizedElectronegativity(ca2j.getSymbol()) > 1) {
+			if (ap.getNormalizedElectronegativity(ca2j.getSymbol()) > 1) {
 				OxNum += atomContainer.getBond(ca0, ca2j).getOrder();
 			}
 
@@ -1475,7 +1475,7 @@
 			// if (s.equals("F") || s.equals("O") || s.equals("Cl")
 			// || s.equals("Br") || s.equals("N") || s.equals("S"))
 
-			if (ap.GetNormalizedElectronegativity(s) > 1) {
+			if (ap.getNormalizedElectronegativity(s) > 1) {
 				// // F,O,Cl,Br,N
 				OxNum += atomContainer.getBond(ca0, ca2j).getOrder();
 			}
@@ -1551,7 +1551,7 @@
 			// if (s.equals("F") || s.equals("O") || s.equals("Cl")
 			// || s.equals("Br") || s.equals("N") || s.equals("S"))
 
-			if (ap.GetNormalizedElectronegativity(ca2j.getSymbol()) > 1) {
+			if (ap.getNormalizedElectronegativity(ca2j.getSymbol()) > 1) {
 				OxNum += atomContainer.getBond(ca0, ca2j).getOrder();
 			}
 
@@ -1627,7 +1627,7 @@
 			// if (s.equals("F") || s.equals("O") || s.equals("Cl")
 			// || s.equals("Br") || s.equals("N") || s.equals("S"))
 
-			if (ap.GetNormalizedElectronegativity(ca2j.getSymbol()) > 1) {
+			if (ap.getNormalizedElectronegativity(ca2j.getSymbol()) > 1) {
 				OxNum += atomContainer.getBond(ca0, ca2j).getOrder();
 			}
 


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