Content-Type: multipart/mixed; boundary="Apple-Mail=_61B08673-C37C-4C53-9911-208C5B6693BD" --Apple-Mail=_61B08673-C37C-4C53-9911-208C5B6693BD Content-Transfer-Encoding: quoted-printable Content-Type: text/html; charset=us-ascii eclipse -nosplash -application = org.eclipse.jdt.core.JavaCodeFormatter -config = ~/workspace/github/johnmay/cdk/org.eclipse.jdt.core.prefs = ~/workspace/github/johnmay/cdk/src/main/<= div> 
Most of the changes were column alignment, but = unfortunately it won't do everything. For example, I could not find a = way to align arrays nicely.

new IAtom[]{ new = Atom("H"),
=      new Atom("H"),
       new Atom("O") = };

Here is what I changed = from the eclipse 'java conventions = [built-in]'.

Indentation
+ Tab policy: Spaces only
+ Align fields to columns
+ Indent, Spaces within 'case' = body

Blank Lines
+ = Before first declaration: 1

Line = Wrapping
    General = Settings
    + Line = Wrapping: 100
    + = Never join already wrapped lines

    = Annotations
      =   Element-value pairs
  =       + Wrap all elements, except first element if not = necessary
      =   + Indent on column

    = 'enum' declaration
    =     Constants
  =       + Wrap all elements, every element on a new = line

    Function calls
        = Arguments
      =   + Indent on column
  =       Explicit constructor = invocations
      =   + Indent on column
  =       Object allocation arguments
        + Indent on column   =  
        = Qualified object allocation arguments
        + Indent on = column

    Expression
        Binary = Expressions
      =   + Indent on column
  =       Conditionals
        + Indent on = column
        = Array init
      =   + Indent on column

    = Statements
      =   Try-with-resources
  =       + Indent on column
        = Multi-catch
      =   + Indent on column

Comments
+ Remove = blank lines (javadoc)
+ Remove = blank lines (block) =  

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org.eclipse.jdt.core.formatter.alignment_for_assignment=0 org.eclipse.jdt.core.formatter.alignment_for_binary_expression=18 org.eclipse.jdt.core.formatter.alignment_for_compact_if=16 org.eclipse.jdt.core.formatter.alignment_for_conditional_expression=82 org.eclipse.jdt.core.formatter.alignment_for_enum_constants=48 org.eclipse.jdt.core.formatter.alignment_for_expressions_in_array_initializer=18 org.eclipse.jdt.core.formatter.alignment_for_method_declaration=0 org.eclipse.jdt.core.formatter.alignment_for_multiple_fields=16 org.eclipse.jdt.core.formatter.alignment_for_parameters_in_constructor_declaration=16 org.eclipse.jdt.core.formatter.alignment_for_parameters_in_method_declaration=16 org.eclipse.jdt.core.formatter.alignment_for_resources_in_try=82 org.eclipse.jdt.core.formatter.alignment_for_selector_in_method_invocation=16 org.eclipse.jdt.core.formatter.alignment_for_superclass_in_type_declaration=16 org.eclipse.jdt.core.formatter.alignment_for_superinterfaces_in_enum_declaration=16 org.eclipse.jdt.core.formatter.alignment_for_superinterfaces_in_type_declaration=16 org.eclipse.jdt.core.formatter.alignment_for_throws_clause_in_constructor_declaration=16 org.eclipse.jdt.core.formatter.alignment_for_throws_clause_in_method_declaration=16 org.eclipse.jdt.core.formatter.alignment_for_union_type_in_multicatch=18 org.eclipse.jdt.core.formatter.blank_lines_after_imports=1 org.eclipse.jdt.core.formatter.blank_lines_after_package=1 org.eclipse.jdt.core.formatter.blank_lines_before_field=0 org.eclipse.jdt.core.formatter.blank_lines_before_first_class_body_declaration=1 org.eclipse.jdt.core.formatter.blank_lines_before_imports=1 org.eclipse.jdt.core.formatter.blank_lines_before_member_type=1 org.eclipse.jdt.core.formatter.blank_lines_before_method=1 org.eclipse.jdt.core.formatter.blank_lines_before_new_chunk=1 org.eclipse.jdt.core.formatter.blank_lines_before_package=0 org.eclipse.jdt.core.formatter.blank_lines_between_import_groups=1 org.eclipse.jdt.core.formatter.blank_lines_between_type_declarations=1 org.eclipse.jdt.core.formatter.brace_position_for_annotation_type_declaration=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_anonymous_type_declaration=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_array_initializer=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_block=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_block_in_case=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_constructor_declaration=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_enum_constant=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_enum_declaration=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_method_declaration=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_switch=end_of_line org.eclipse.jdt.core.formatter.brace_position_for_type_declaration=end_of_line org.eclipse.jdt.core.formatter.comment.clear_blank_lines_in_block_comment=true org.eclipse.jdt.core.formatter.comment.clear_blank_lines_in_javadoc_comment=true org.eclipse.jdt.core.formatter.comment.format_block_comments=true org.eclipse.jdt.core.formatter.comment.format_header=false org.eclipse.jdt.core.formatter.comment.format_html=true org.eclipse.jdt.core.formatter.comment.format_javadoc_comments=true org.eclipse.jdt.core.formatter.comment.format_line_comments=true org.eclipse.jdt.core.formatter.comment.format_source_code=true org.eclipse.jdt.core.formatter.comment.indent_parameter_description=true org.eclipse.jdt.core.formatter.comment.indent_root_tags=true org.eclipse.jdt.core.formatter.comment.insert_new_line_before_root_tags=insert org.eclipse.jdt.core.formatter.comment.insert_new_line_for_parameter=insert org.eclipse.jdt.core.formatter.comment.line_length=80 org.eclipse.jdt.core.formatter.comment.new_lines_at_block_boundaries=true org.eclipse.jdt.core.formatter.comment.new_lines_at_javadoc_boundaries=true org.eclipse.jdt.core.formatter.comment.preserve_white_space_between_code_and_line_comments=false org.eclipse.jdt.core.formatter.compact_else_if=true org.eclipse.jdt.core.formatter.continuation_indentation=2 org.eclipse.jdt.core.formatter.continuation_indentation_for_array_initializer=2 org.eclipse.jdt.core.formatter.disabling_tag=@formatter\:off org.eclipse.jdt.core.formatter.enabling_tag=@formatter\:on org.eclipse.jdt.core.formatter.format_guardian_clause_on_one_line=false org.eclipse.jdt.core.formatter.format_line_comment_starting_on_first_column=true org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_annotation_declaration_header=true org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_enum_constant_header=true org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_enum_declaration_header=true org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_type_header=true org.eclipse.jdt.core.formatter.indent_breaks_compare_to_cases=true org.eclipse.jdt.core.formatter.indent_empty_lines=false org.eclipse.jdt.core.formatter.indent_statements_compare_to_block=true org.eclipse.jdt.core.formatter.indent_statements_compare_to_body=true org.eclipse.jdt.core.formatter.indent_switchstatements_compare_to_cases=true org.eclipse.jdt.core.formatter.indent_switchstatements_compare_to_switch=true org.eclipse.jdt.core.formatter.indentation.size=8 org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_field=insert org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_local_variable=insert org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_method=insert org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_package=insert org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_parameter=do not insert org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_type=insert org.eclipse.jdt.core.formatter.insert_new_line_after_label=do not insert org.eclipse.jdt.core.formatter.insert_new_line_after_opening_brace_in_array_initializer=do not insert org.eclipse.jdt.core.formatter.insert_new_line_at_end_of_file_if_missing=do not insert org.eclipse.jdt.core.formatter.insert_new_line_before_catch_in_try_statement=do not insert org.eclipse.jdt.core.formatter.insert_new_line_before_closing_brace_in_array_initializer=do not insert org.eclipse.jdt.core.formatter.insert_new_line_before_else_in_if_statement=do not insert org.eclipse.jdt.core.formatter.insert_new_line_before_finally_in_try_statement=do not insert org.eclipse.jdt.core.formatter.insert_new_line_before_while_in_do_statement=do not insert org.eclipse.jdt.core.formatter.insert_new_line_in_empty_annotation_declaration=insert org.eclipse.jdt.core.formatter.insert_new_line_in_empty_anonymous_type_declaration=insert 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org.eclipse.jdt.core.formatter.insert_space_after_comma_in_enum_constant_arguments=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_enum_declarations=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_explicitconstructorcall_arguments=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_for_increments=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_for_inits=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_method_declaration_parameters=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_method_declaration_throws=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_method_invocation_arguments=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_multiple_field_declarations=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_multiple_local_declarations=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_parameterized_type_reference=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_superinterfaces=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_type_arguments=insert org.eclipse.jdt.core.formatter.insert_space_after_comma_in_type_parameters=insert org.eclipse.jdt.core.formatter.insert_space_after_ellipsis=insert org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_parameterized_type_reference=do not insert org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_type_arguments=do not insert org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_type_parameters=do not insert org.eclipse.jdt.core.formatter.insert_space_after_opening_brace_in_array_initializer=insert org.eclipse.jdt.core.formatter.insert_space_after_opening_bracket_in_array_allocation_expression=do not insert org.eclipse.jdt.core.formatter.insert_space_after_opening_bracket_in_array_reference=do not insert 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org.eclipse.jdt.core.formatter.insert_space_before_comma_in_method_invocation_arguments=do not insert org.eclipse.jdt.core.formatter.insert_space_before_comma_in_multiple_field_declarations=do not insert org.eclipse.jdt.core.formatter.insert_space_before_comma_in_multiple_local_declarations=do not insert org.eclipse.jdt.core.formatter.insert_space_before_comma_in_parameterized_type_reference=do not insert org.eclipse.jdt.core.formatter.insert_space_before_comma_in_superinterfaces=do not insert org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_arguments=do not insert org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_parameters=do not insert org.eclipse.jdt.core.formatter.insert_space_before_ellipsis=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_parameterized_type_reference=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_type_arguments=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_type_parameters=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_annotation_type_declaration=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_anonymous_type_declaration=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_array_initializer=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_block=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_constructor_declaration=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_enum_constant=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_enum_declaration=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_method_declaration=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_switch=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_type_declaration=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_bracket_in_array_allocation_expression=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_bracket_in_array_reference=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_bracket_in_array_type_reference=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_annotation=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_annotation_type_member_declaration=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_catch=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_constructor_declaration=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_enum_constant=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_for=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_if=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_method_declaration=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_method_invocation=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_parenthesized_expression=do not insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_switch=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_synchronized=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_try=insert org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_while=insert org.eclipse.jdt.core.formatter.insert_space_before_parenthesized_expression_in_return=insert org.eclipse.jdt.core.formatter.insert_space_before_parenthesized_expression_in_throw=insert org.eclipse.jdt.core.formatter.insert_space_before_postfix_operator=do not insert org.eclipse.jdt.core.formatter.insert_space_before_prefix_operator=do not insert org.eclipse.jdt.core.formatter.insert_space_before_question_in_conditional=insert org.eclipse.jdt.core.formatter.insert_space_before_question_in_wildcard=do not insert org.eclipse.jdt.core.formatter.insert_space_before_semicolon=do not insert org.eclipse.jdt.core.formatter.insert_space_before_semicolon_in_for=do not insert org.eclipse.jdt.core.formatter.insert_space_before_semicolon_in_try_resources=do not insert org.eclipse.jdt.core.formatter.insert_space_before_unary_operator=do not insert org.eclipse.jdt.core.formatter.insert_space_between_brackets_in_array_type_reference=do not insert org.eclipse.jdt.core.formatter.insert_space_between_empty_braces_in_array_initializer=do not insert org.eclipse.jdt.core.formatter.insert_space_between_empty_brackets_in_array_allocation_expression=do not insert org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_annotation_type_member_declaration=do not insert org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_constructor_declaration=do not insert org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_enum_constant=do not insert org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_declaration=do not insert org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_invocation=do not insert org.eclipse.jdt.core.formatter.join_lines_in_comments=true org.eclipse.jdt.core.formatter.join_wrapped_lines=false org.eclipse.jdt.core.formatter.keep_else_statement_on_same_line=false org.eclipse.jdt.core.formatter.keep_empty_array_initializer_on_one_line=false org.eclipse.jdt.core.formatter.keep_imple_if_on_one_line=false org.eclipse.jdt.core.formatter.keep_then_statement_on_same_line=false org.eclipse.jdt.core.formatter.lineSplit=100 org.eclipse.jdt.core.formatter.never_indent_block_comments_on_first_column=false org.eclipse.jdt.core.formatter.never_indent_line_comments_on_first_column=false org.eclipse.jdt.core.formatter.number_of_blank_lines_at_beginning_of_method_body=0 org.eclipse.jdt.core.formatter.number_of_empty_lines_to_preserve=1 org.eclipse.jdt.core.formatter.put_empty_statement_on_new_line=false org.eclipse.jdt.core.formatter.tabulation.char=space org.eclipse.jdt.core.formatter.tabulation.size=4 org.eclipse.jdt.core.formatter.use_on_off_tags=false org.eclipse.jdt.core.formatter.use_tabs_only_for_leading_indentations=true org.eclipse.jdt.core.formatter.wrap_before_binary_operator=true org.eclipse.jdt.core.formatter.wrap_before_or_operator_multicatch=true org.eclipse.jdt.core.formatter.wrap_outer_expressions_when_nested=true --Apple-Mail=_61B08673-C37C-4C53-9911-208C5B6693BD Content-Transfer-Encoding: 7bit Content-Type: text/html; charset=us-ascii
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