From: Adam T. <a-t...@st...> - 2007-02-06 18:38:42
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Hi Karol, That fixed it. However, using PyMOlyze this morning exposed another bug. ADF parsers should have frags and fragnames attributes because ADF sometimes alters the atom order so that there isn't a direct mapping between fonames (ie. C1_3s) and atomcoords. Look in the svn log and ADF test files for more details. Adam On Feb 6, 2007, at 6:24 AM, Karol Langner wrote: > That would affect any logfile - I cut out the definition of nstep > without > checking if it is used (and forgot the tests don't check progress). > Revision > 510 is fixed for this. > > Thanks for the testing, > Karol > > On Monday 05 of February 2007 19:07, Adam Tenderholt wrote: >> Minor problem with Rev. 509 and ADF files: >>>>> from cclib.parser import ccopen >>>>> from cclib.progress import TextProgress >>>>> progress = TextProgress() >>>>> import logging >>>>> parser = ccopen("dvb_sp.adfout", progress, logging.ERROR) >>>>> parser.parse() >> >> [=========-] 97% Unsupported informationTraceback (most recent >> call last): >> File "<stdin>", line 1, in ? >> File "/Library/Frameworks/Python.framework/Versions/2.4/lib/ >> python2.4/site-packages/cclib/parser/logfileparser.py", line 223, in >> parse >> self.progress.update(nstep, "Done") >> NameError: global name 'nstep' is not defined >> >> I haven't checked if it affects other calculation files yet. Just >> noticed it when I was using PyMOlyze this morning on an ADF >> file... ;o) >> >> Adam > > -- > written by Karol Langner > Tue Feb 6 15:22:22 CET 2007 > > ---------------------------------------------------------------------- > --- > Using Tomcat but need to do more? Need to support web services, > security? > Get stuff done quickly with pre-integrated technology to make your > job easier. > Download IBM WebSphere Application Server v.1.0.1 based on Apache > Geronimo > http://sel.as-us.falkag.net/sel? > cmd=lnk&kid=120709&bid=263057&dat=121642 > _______________________________________________ > cclib-devel mailing list > ccl...@li... > https://lists.sourceforge.net/lists/listinfo/cclib-devel |