Home

CAM is a QC and analysis pipeline for MNase-seq data. By applying this pipeline, CAM uses either raw sequencing files or aligned files as an input (supporting both paired-end and single-end data; see our testing data and the Manual section for more information) and provides three informative QC measurements and nucleosome organization profiles for three types of potentially functionally related regions for a given MNase-seq dataset. CAM also includes 268 historical MNase-seq datasets from humans and mice as a reference atlas for unbiased assessment.