It is solved now. When editing the sbml it created a new XML with
<? xml version="1.0" ?>
instead of
<? xml version="1.0" encoding="UTF-8" ?>
Additionally I found a bug with local parameters which is solved now. The testing case with model 50 is sucessful, you add a new reaction and the runner will mark the mistake that all parameters in model 50 are local, so a global parameter can be created for this new reaction.
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When I save a new reaction in the biomodel 50, if I run a simulation, I get an error. The reason is because the parameter values of the new reaction are not defined.
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
This has been solved in the development env.
It is solved now. When editing the sbml it created a new XML with
<? xml version="1.0" ?>
instead of
<? xml version="1.0" encoding="UTF-8" ?>
Additionally I found a bug with local parameters which is solved now. The testing case with model 50 is sucessful, you add a new reaction and the runner will mark the mistake that all parameters in model 50 are local, so a global parameter can be created for this new reaction.
When I save a new reaction in the biomodel 50, if I run a simulation, I get an error. The reason is because the parameter values of the new reaction are not defined.