1) Liver quest: it seems that the script wants to prioritize other things first than the liver, and in odd ways. It puts hippy outfit higher priority than liver; also, it will sometimes start it but then not continue: for example, it did the rock band part of the quest, then it decided that at level 8 and all quests past level 6 still incomplete, it felt the need to level up.
2) KGE outfit: In BHY, the script went for the outfit through a fax, then got the harem outfit, and beat the king. It also unlocked the dispensary despite not being able to use anything from there. I decided to feed the parts to my slimeling, and the next day it decided it needed the KGE outfit again.
3) Equip priority - in continuing after getting liver, the script went to the haunted library, then from there the haunted conservatory. In the process, it removed my ninja hot pants and put on old sweatpants, and kept wearing these even when it started adventuring in the Cyrpt.
I sent the logs of the other two days involved in these issues; here's today's.