phi committed [9da737]

Initial version 0.1 of SNPDIST example program source

biOP released /examples/Snpdist-v0-1_example_compiled-win64_2018-07-24.zip

phi committed [c85eb2]

bioGbk 0.0.0001 - Genbank flatfile reader, first (limited) version

biOP released /biop4r_compiled/2018-07-23/biOP4R64_beta_compiled_v0-04-0009_2018-07-23_WinLinux.zip

phi committed [af7fef]

1.2.0003 - Minor changes enhancements in ExportVcf2BinBiallelic; Changed DefaultVcfmergeOutUnk[Ref/Alt]AlleleSymb defaults

phi committed [fcee48]

bioQSeqs 2.0.0001 - Added .ListSeqs

phi committed [12f6b2]

phiStruc 1.0.0002 - fixed serious bug in definition of ValNBitMasks

phi committed [36e5de]

phiStr 3.0.0004 - added SubStr, StrRgn, SubStrEq, CvtADw2AStr, renamed CvtAStr2ADw

phi committed [e8e699]

bioSeq 2.0.0006 - Added DEFINE_LOWERCASE_NUCLEOTIDES define to allow sequence manipulations with lower-case letters

phi committed [6dd2ff]

bioVCF 1.2.0014 - Added HasUnkRefAllele, OverlapsNextVariants, GetMeanChromCoveragePerInd; changes to definitions and IsPolymorphic and GetSampleAlleles

phi committed [50f187]

phiBase 4.0.0012 - mostly fixes for Linux64/FPC

phi committed [5508c2]

bioTXcf 1.2.0002 - bug fix in ExportVcf2BinBiallelic

phi committed [854ad9]

bioVCF 1.2.0013 - Changes/fixes to .GetChromAlleles et al.

phi committed [e5a369]

phiBase 4.0.0010 - Fixed bugs in CpyMem_ERMSB/RepValB_ERMSB

phi committed [07ebd7]

phiBase 4.0.0009 - Fixed AscD x64 bug; Added ERMSB code (CpyMem, RepValB, CPUID feature detection)

phi committed [8ab3d2]

Added TMMTF.LoadToAStr convenience function; removed .CreateWithDecoder

phi committed [161d3f]

Added TTsvFile alias

phi committed [062d2b]

Improved ConcatAStr, fixed bug in ScnChsExF

phi committed [12f0aa]

bioFastAQ 1.0.0001 - Added TFastaFile.GetSeqIDByNameStart etc.

phi committed [293190]

bioGFF3 1.0.0001 - Added .LoadGFFfromAStr

phi committed [dceae0]

bioBGZF 2.0.0005 - minor bug fix

phi committed [4250de]

bioVCF 1.2.0009 - Added GetChromVariants, GetChromAlleles and GetSampleAlleles, and minor fixes

phi committed [f9da77]

bioBGZF 2.0.0004 - added convenience function .MakeZDecoder

phi committed [1a3626]

uTExtendedX87 - added single space that makes FPC happy

phi committed [118a32]

phiMMF 1.1.0016 - Fixed .NextValidViewOffset, small changes for Linux

phi committed [bec95d]

phiStruc 1.0.0001 - made AsByte the default property of TMemArray

phi committed [134383]

phiBase 4.0.0008 - some small new definitions; small fixes, esp. w.r.t. stack allocation functions

phi committed [984e19]

bioDelphi2C 1.0.0008 - added vcfCloseFile

phi committed [fd6476]

bioDelphi2R 1.0.0007 - added bdVcfCloseFile

phi committed [12e772]

bioDelphi2R 1.0.0006 - bug fix for a nasty pointer issue

phi committed [f76837]

RPascalLight 2017-07-11 - added NA constants/variables

phi committed [f64fef]

phiBase 4.0.0006; bug fixes to Linux64's ProcFastCall; new Get/FreeStackMem and SetPStrStack among others

phi committed [8e6a6b]

bioDelphi2R 1.0.0005 - a few new functions, changes to bdVcfMerge

phi committed [ec6c03]

bioTXcf 1.2.0001; bug fix for vcfMerge under DCC64 v32.0

phi committed [ff7e47]

phiFileIO 1.2.0002; added Linux version for PeekFileStart

phi committed [29a4a7]

biOP4R.dpr 2017-04-28

phi committed [bdb196]

bioDelphi2C 1.0.0007 - various small additions and bug fixes

phi committed [74ea65]

bioTXcf 1.2.0000 - BREAKING CHANGE in vcfMerge implementation; bug fixes, esp. re. GVCF merging

biOP released /biop4r_compiled/2017-05-04/biop4r_beta_compiled+R_0-04-7_2017-05-04_Win.zip

phi committed [e14099]

phiStr 3.0.0001 - added TrcStrAtDelim[Ex]R

phi committed [46d78f]

phiBase 4.0.0004; new ifelse version, 2nd try

phi committed [9a1a61]

Added riMkCharLen

phi committed [c3558e]

bioSeq 2.0.0005; minor IFDEF changes

phi committed [f67098]

uTExtendedX87 0.0006: Compiles on FPC3/Win64 + minor changes

phi committed [14135d]

phiBase 4.0.0004; new ifelse version

phi committed [86f979]

phiMMF 1.1.015; minor definition addition

phi committed [74cc42]

phiFileIO update 1.2.0001; changes to PeekFileStart

phi committed [01ffeb]

bioHPUX update 1.0.0001; added method UnloadFile

phi committed [c20736]

Updated to bioVCF 1.2.0006

phi committed [1b530c]

Initial commit

biOP released /biop4r_compiled/2017-04-07/biop4r_beta_compiled+R_0-04_2017-04-07_Win.zip

biOP released /biop4r_compiled/2014-10-20/biop4r_2014-10-20.zip

biOP released /src/src_2017-04-07/bioSAM.pas

biOP released /src/src_2017-04-07/bioAlgmt.pas

biOP released /src/src_2017-04-07/bioABIF.pas

biOP released /src/src_2017-04-07/phiMMTF.pas

biOP released /src/src_2017-04-07/bioTXcf.pas

biOP released /src/src_2017-04-07/bioDelphi2R.pas

biOP released /src/src_2017-04-07/bioSeq.pas

biOP released /src/src_2017-04-07/phiBase.pas

biOP released /src/src_2017-04-07/RPascalLight.pas

biOP released /src/src_2017-04-07/bioHPUX.pas

biOP released /src/src_2017-04-07/bioBAM.pas

biOP released /src/src_2017-04-07/bioVCF.pas

biOP released /src/src_2017-04-07/bioGFF3.pas

biOP released /src/src_2017-04-07/phiCSV.pas

biOP released /src/src_2017-04-07/bioTNgs.pas

biOP released /src/src_2017-04-07/bioTFaq.pas

biOP released /src/src_2017-04-07/phiStr.pas

biOP released /src/src_2017-04-07/bioCIGAR.pas

biOP released /src/src_2017-04-07/phiTF.pas

biOP released /src/src_2017-04-07/phiFileIO.pas

biOP released /src/src_2017-04-07/biOP4R.dpr

biOP released /src/src_2017-04-07/phiMiniQ.pas

biOP released /src/src_2017-04-07/phiBase32.obj

biOP released /src/src_2017-04-07/phiMMF.pas

biOP released /src/src_2017-04-07/bioPDB.pas

biOP released /src/src_2017-04-07/phiBase64.asm

biOP released /src/src_2017-04-07/phiBase32.asm

biOP released /src/src_2017-04-07/bioQSeqs.pas

biOP released /src/src_2017-04-07/bioFastAQ.pas

biOP released /src/src_2017-04-07/bioPop.pas

biOP released /src/src_2017-04-07/phiBase32_coff.obj

biOP released /src/src_2017-04-07/bioSOFA.pas

biOP released /src/src_2017-04-07/phiBase64.obj

biOP released /src/src_2017-04-07/phiDTF.pas

biOP released /src/src_2017-04-07/phiStruc.pas

biOP released /src/src_2017-04-07/bioBGZF.pas

biOP released /src/src_2017-04-07/bioDelphi2C.pas

biOP released /src/src_2017-04-07/bioBCF.pas

biOP released /src/src_2017-04-07/uTExtendedX87.pas

biOP released /biop4r_beta_compiled+R_0-04_2017-04-07_Win.zip

biOP released /biop4r_pre-alpha_v0-001.zip