[Bio2rdf-svncommits] SF.net SVN: bio2rdf:[934] trunk/src

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Revision: 934
          http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=934&view=rev
Author:   p_ansell
Date:     2011-02-06 01:30:28 +0000 (Sun, 06 Feb 2011)

Log Message:
-----------
move pipes back to war from the jar file

Modified Paths:
--------------
    trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
    trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
    trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
    trunk/src/war/WEB-INF/webapp-config-bio2rdf-default.n3

Added Paths:
-----------
    trunk/src/war/WEB-INF/pipes/
    trunk/src/war/WEB-INF/pipes/bio2rdf_all_partial_common_uris.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_basic.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_basic_from_multiple_uri.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_basic_from_uri.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_pr_tr_co_in_bi_ci_mesh.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_promoter_transcriptionunits.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_promoter_transcriptionunits_components.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_promoter_transcriptionunits_components_involvedinregulations.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_promoter_transcriptionunits_components_involvedinregulations_bindingsites.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_promoter_transcriptionunits_components_involvedinregulations_bindingsites_citations.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_regulators.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_regulators_citations.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ecocyc_regulators_citations_short.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_geneid_to_hgnc_symbol.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_geneid_to_hgnc_to_drugbank.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_geneid_to_hgnc_to_drugbank_drugs.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_geneid_to_hgnc_to_drugbank_targets.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_geneid_to_hgnc_to_uniprot.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_geneid_to_hgnc_to_uniprot_to_drugbank.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_gi_geneid_iproclass.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_gi_to_geneid_to_pubmed.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_gi_to_go.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_gi_to_pubmed.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_linkstonamespace_from_multiple_helper.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_multiple_by_namespace.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ncbigi_to_pubmed_to_mesh.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_ncbigi_to_pubmed_to_mesh_labels.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_partial_common_uris_by_namespace.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_similar_drugbank_drugs_by_drugbank_targets.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_similar_drugbank_targets_by_pfam_pdb.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_subject_object_slicing.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_subject_object_slicing_from_uri.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_transform_uri_rdfxml.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_transform_uri_rdfxml_linksns_style.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_transform_uri_rdfxml_linkstonamespace_style.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_uri_rank.pipe
    trunk/src/war/WEB-INF/pipes/bio2rdf_uri_rank_from_uri.pipe
    trunk/src/war/WEB-INF/pipes/cache.ccf
    trunk/src/war/WEB-INF/pipes/operatormapping.xml
    trunk/src/war/WEB-INF/pipes/pipes.list

Removed Paths:
-------------
    trunk/src/jar/src/bio2rdf_all_partial_common_uris.pipe
    trunk/src/jar/src/bio2rdf_basic.pipe
    trunk/src/jar/src/bio2rdf_basic_from_multiple_uri.pipe
    trunk/src/jar/src/bio2rdf_basic_from_uri.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_pr_tr_co_in_bi_ci_mesh.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_promoter_transcriptionunits.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_promoter_transcriptionunits_components.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_promoter_transcriptionunits_components_involvedinregulations.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_promoter_transcriptionunits_components_involvedinregulations_bindingsites.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_promoter_transcriptionunits_components_involvedinregulations_bindingsites_citations.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_regulators.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_regulators_citations.pipe
    trunk/src/jar/src/bio2rdf_ecocyc_regulators_citations_short.pipe
    trunk/src/jar/src/bio2rdf_geneid_to_hgnc_symbol.pipe
    trunk/src/jar/src/bio2rdf_geneid_to_hgnc_to_drugbank.pipe
    trunk/src/jar/src/bio2rdf_geneid_to_hgnc_to_drugbank_drugs.pipe
    trunk/src/jar/src/bio2rdf_geneid_to_hgnc_to_drugbank_targets.pipe
    trunk/src/jar/src/bio2rdf_geneid_to_hgnc_to_uniprot.pipe
    trunk/src/jar/src/bio2rdf_geneid_to_hgnc_to_uniprot_to_drugbank.pipe
    trunk/src/jar/src/bio2rdf_gi_geneid_iproclass.pipe
    trunk/src/jar/src/bio2rdf_gi_to_geneid_to_pubmed.pipe
    trunk/src/jar/src/bio2rdf_gi_to_go.pipe
    trunk/src/jar/src/bio2rdf_gi_to_pubmed.pipe
    trunk/src/jar/src/bio2rdf_linkstonamespace_from_multiple_helper.pipe
    trunk/src/jar/src/bio2rdf_multiple_by_namespace.pipe
    trunk/src/jar/src/bio2rdf_ncbigi_to_pubmed_to_mesh.pipe
    trunk/src/jar/src/bio2rdf_ncbigi_to_pubmed_to_mesh_labels.pipe
    trunk/src/jar/src/bio2rdf_partial_common_uris_by_namespace.pipe
    trunk/src/jar/src/bio2rdf_similar_drugbank_drugs_by_drugbank_targets.pipe
    trunk/src/jar/src/bio2rdf_similar_drugbank_targets_by_pfam_pdb.pipe
    trunk/src/jar/src/bio2rdf_subject_object_slicing.pipe
    trunk/src/jar/src/bio2rdf_subject_object_slicing_from_uri.pipe
    trunk/src/jar/src/bio2rdf_transform_uri_rdfxml.pipe
    trunk/src/jar/src/bio2rdf_transform_uri_rdfxml_linksns_style.pipe
    trunk/src/jar/src/bio2rdf_transform_uri_rdfxml_linkstonamespace_style.pipe
    trunk/src/jar/src/bio2rdf_uri_rank.pipe
    trunk/src/jar/src/bio2rdf_uri_rank_from_uri.pipe
    trunk/src/jar/src/cache.ccf
    trunk/src/jar/src/operatormapping.xml
    trunk/src/jar/src/pipes.list

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