Thread: [Bio2rdf-svncommits] SF.net SVN: bio2rdf:[304] trunk/src/war/WEB-INF
Brought to you by:
fbelleau,
vincentemonet
Menu
▾
▴
bio2rdf-svncommits
|
From: <p_a...@us...> - 2009-04-17 08:05:12
|
Revision: 304
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=304&view=rev
Author: p_ansell
Date: 2009-04-17 08:05:11 +0000 (Fri, 17 Apr 2009)
Log Message:
-----------
add some multifetch functionality
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetcherUriQueryRunnable.java
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-05-17 23:35:37
|
Revision: 450
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=450&view=rev
Author: p_ansell
Date: 2009-05-17 23:35:29 +0000 (Sun, 17 May 2009)
Log Message:
-----------
fix prosite, prodom and interpro
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-05-18 07:30:19
|
Revision: 453
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=453&view=rev
Author: p_ansell
Date: 2009-05-18 07:30:11 +0000 (Mon, 18 May 2009)
Log Message:
-----------
add sider to the list of supported external databases
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-05-18 09:33:53
|
Revision: 456
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=456&view=rev
Author: p_ansell
Date: 2009-05-18 09:33:52 +0000 (Mon, 18 May 2009)
Log Message:
-----------
add rewrite to standardise the dictybase namespace and have a backup resolution for any stray referenes to dictybase_ref
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-05-18 09:35:53
|
Revision: 457
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=457&view=rev
Author: p_ansell
Date: 2009-05-18 09:35:45 +0000 (Mon, 18 May 2009)
Log Message:
-----------
undo changes as dictybase_ref is a legitimate namespace
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-05-22 07:31:41
|
Revision: 466
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=466&view=rev
Author: p_ansell
Date: 2009-05-22 07:31:32 +0000 (Fri, 22 May 2009)
Log Message:
-----------
fix gene_expression_database at MGI looking URI's and fix mesh since the endpoint has been recreated with normalised URI's
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-05-25 11:05:17
|
Revision: 484
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=484&view=rev
Author: p_ansell
Date: 2009-05-25 11:05:09 +0000 (Mon, 25 May 2009)
Log Message:
-----------
add more structure to the creation of ProviderConfiguration's from RDF
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/test-bio2rdf-configuration.n3
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-05-26 05:33:02
|
Revision: 491
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=491&view=rev
Author: p_ansell
Date: 2009-05-26 05:32:54 +0000 (Tue, 26 May 2009)
Log Message:
-----------
get customquery import from rdf working
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
trunk/src/war/WEB-INF/src/org/bio2rdf/ProviderConfiguration.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/test-bio2rdf-configuration.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-09 00:51:40
|
Revision: 514
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=514&view=rev
Author: p_ansell
Date: 2009-06-09 00:29:18 +0000 (Tue, 09 Jun 2009)
Log Message:
-----------
more bug fixes
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfNormalisationRule.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/test-bio2rdf-configuration.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-09 04:08:22
|
Revision: 518
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=518&view=rev
Author: p_ansell
Date: 2009-06-09 04:07:15 +0000 (Tue, 09 Jun 2009)
Log Message:
-----------
fix up the base configuration by fixing the way that the items are generated for RDF Rules
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfNormalisationRule.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/SparqlQueryCreator.java
trunk/src/war/WEB-INF/test-bio2rdf-configuration.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-10 05:11:32
|
Revision: 523
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=523&view=rev
Author: p_ansell
Date: 2009-06-10 05:10:53 +0000 (Wed, 10 Jun 2009)
Log Message:
-----------
modularise the N3 configuration files to make them easier to edit and remove all use of IMPORT_FROM_RDF
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/Profile.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
Added Paths:
-----------
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-profiles-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-ruletests-config.n3
Removed Paths:
-------------
trunk/src/war/WEB-INF/test-bio2rdf-configuration.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-16 11:34:17
|
Revision: 539
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=539&view=rev
Author: p_ansell
Date: 2009-06-16 11:33:31 +0000 (Tue, 16 Jun 2009)
Log Message:
-----------
add namespace, provider, and profile entry for statistics
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-profiles-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-17 22:47:38
|
Revision: 544
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=544&view=rev
Author: p_ansell
Date: 2009-06-17 22:46:27 +0000 (Wed, 17 Jun 2009)
Log Message:
-----------
add bind entries
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-21 03:06:38
|
Revision: 547
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=547&view=rev
Author: p_ansell
Date: 2009-06-21 03:06:37 +0000 (Sun, 21 Jun 2009)
Log Message:
-----------
add configuration api version information to the /admin/configuration URL's so that in future people can select the API they can use and the software may be able to translate its current version back to that version
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-22 01:09:27
|
Revision: 551
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=551&view=rev
Author: p_ansell
Date: 2009-06-22 01:09:26 +0000 (Mon, 22 Jun 2009)
Log Message:
-----------
delete extraneous comment lines from RDF configuration files
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-namespaceentries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-profiles-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-ruletests-config.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-22 03:22:11
|
Revision: 552
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=552&view=rev
Author: p_ansell
Date: 2009-06-22 01:43:57 +0000 (Mon, 22 Jun 2009)
Log Message:
-----------
some more cleanup
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfFetchController.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-22 04:00:13
|
Revision: 561
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=561&view=rev
Author: p_ansell
Date: 2009-06-22 04:00:12 +0000 (Mon, 22 Jun 2009)
Log Message:
-----------
fix ruletests so automated testing works once again
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-ruletests-config.n3
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfNormalisationRule.java
trunk/src/war/WEB-INF/src/org/bio2rdf/RuleTest.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-22 06:56:43
|
Revision: 568
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=568&view=rev
Author: p_ansell
Date: 2009-06-22 06:56:41 +0000 (Mon, 22 Jun 2009)
Log Message:
-----------
fix up incorrect profiles on rdf rules and incorrect URI's on mquter database providers
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-24 02:22:14
|
Revision: 584
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=584&view=rev
Author: p_ansell
Date: 2009-06-24 01:40:42 +0000 (Wed, 24 Jun 2009)
Log Message:
-----------
change namespace match method to avoid a bug, still need to find bug
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/src/log4j.properties
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-06-24 22:02:18
|
Revision: 586
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=586&view=rev
Author: p_ansell
Date: 2009-06-24 22:02:17 +0000 (Wed, 24 Jun 2009)
Log Message:
-----------
fix rdf rule ordering, order wasn't being imported from the configuration
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-rdfrules-config.n3
trunk/src/war/WEB-INF/src/org/bio2rdf/RdfNormalisationRule.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-07-08 05:24:26
|
Revision: 606
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=606&view=rev
Author: p_ansell
Date: 2009-07-08 05:24:25 +0000 (Wed, 08 Jul 2009)
Log Message:
-----------
commit current work, however it doesn't currently resolve anything for HTML requests due to an issue with velocity
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/log4j.properties
trunk/src/war/WEB-INF/src/org/bio2rdf/HtmlPageRenderer.java
trunk/src/war/WEB-INF/src/org/bio2rdf/QueryBundle.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/VelocityHelper.java
trunk/src/war/WEB-INF/templates/footer.vm
trunk/src/war/WEB-INF/templates/header.vm
trunk/src/war/WEB-INF/templates/page.vm
trunk/src/war/WEB-INF/templates/pathpage.vm
trunk/src/war/WEB-INF/templates/proptable.vm
Added Paths:
-----------
trunk/src/war/WEB-INF/lib/oro-2.0.8.jar
trunk/src/war/WEB-INF/lib/velocity-1.6.2.jar
Removed Paths:
-------------
trunk/src/war/WEB-INF/lib/velocity-dep-1.4.jar
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-07-15 00:31:49
|
Revision: 609
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=609&view=rev
Author: p_ansell
Date: 2009-07-15 00:31:37 +0000 (Wed, 15 Jul 2009)
Log Message:
-----------
make Velocity work again by adding commons-collections dependency
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/VelocityHelper.java
Added Paths:
-----------
trunk/src/war/WEB-INF/lib/commons-collections-3.2.jar
trunk/src/war/WEB-INF/templates/endpoints.vm
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-07-15 01:51:32
|
Revision: 610
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=610&view=rev
Author: p_ansell
Date: 2009-07-15 01:51:28 +0000 (Wed, 15 Jul 2009)
Log Message:
-----------
make html page rendering directly accessible using /page/ and make rdfxml accessible using /rdfxml/
Modified Paths:
--------------
trunk/src/war/WEB-INF/src/org/bio2rdf/Bio2RdfContentNegotiator.java
trunk/src/war/WEB-INF/src/org/bio2rdf/CustomQuery.java
trunk/src/war/WEB-INF/src/org/bio2rdf/HtmlPageRenderer.java
trunk/src/war/WEB-INF/src/org/bio2rdf/QueryBundle.java
trunk/src/war/WEB-INF/src/org/bio2rdf/Settings.java
trunk/src/war/WEB-INF/src/org/bio2rdf/VelocityHelper.java
trunk/src/war/WEB-INF/src/org/bio2rdf/bio2rdf.properties
trunk/src/war/WEB-INF/templates/endpoints.vm
trunk/src/war/WEB-INF/templates/header.vm
trunk/src/war/WEB-INF/test-configuration.n3
trunk/src/war/WEB-INF/urlrewrite.xml
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-07-26 02:16:27
|
Revision: 623
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=623&view=rev
Author: p_ansell
Date: 2009-07-26 02:16:21 +0000 (Sun, 26 Jul 2009)
Log Message:
-----------
add regex search option, and change all current references to http://bio2rdf.org/query:search so that there is no ambiguity between the virtuoso bif:contains and the sparql regex search method
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-profiles-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/base-bio2rdf-queries-config.n3
trunk/src/war/WEB-INF/my-local-configuration-example.n3
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
|
From: <p_a...@us...> - 2009-07-29 22:37:36
|
Revision: 642
http://bio2rdf.svn.sourceforge.net/bio2rdf/?rev=642&view=rev
Author: p_ansell
Date: 2009-07-29 22:37:23 +0000 (Wed, 29 Jul 2009)
Log Message:
-----------
minor updates to providers and add comment to renderer class
Modified Paths:
--------------
trunk/src/war/WEB-INF/base-bio2rdf-providers-config.n3
trunk/src/war/WEB-INF/src/org/bio2rdf/HtmlPageRenderer.java
This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.
|
×
Want the latest updates on software, tech news, and AI?
Get latest updates about software, tech news, and AI from SourceForge directly in your inbox once a month.
Thanks for helping keep SourceForge clean.
X