From: Joakim S. <joa...@bl...> - 2015-09-11 16:43:31
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It seems to be a problem with the same entry: type Exception report message Problem with entry at -1982077125921865306: lastRootBlock=rootBlock{ rootBlock=1, challisField=53, version=3, nextOffset=18367917264487524, localTime=1441926674289 [Thursday, September 10, 2015 11:11:14 PM UTC], firstCommitTime=1441073445445 [Tuesday, September 1, 2015 2:10:45 AM UTC], lastCommitTime=1441926670929 [Thursday, September 10, 2015 11:11:10 PM UTC], commitCounter=53, commitRecordAddr={off=NATIVE:-451550099,len=422}, commitRecordIndexAddr={off=NATIVE:-468869758,len=220}, blockSequence=106022, quorumToken=-1, metaBitsAddr=13435602594695444, metaStartAddr=4614957, storeType=RW, uuid=d64bf2e9-599b-4f41-8bfe-f3b000f73138, offsetBits=42, checksum=371010502, createTime=1441073445016 [Tuesday, September 1, 2015 2:10:45 AM UTC], closeTime=0} description The server encountered an internal error that prevented it from fulfilling this request. exception java.lang.RuntimeException: Problem with entry at -1982077125921865306: lastRootBlock=rootBlock{ rootBlock=1, challisField=53, version=3, nextOffset=18367917264487524, localTime=1441926674289 [Thursday, September 10, 2015 11:11:14 PM UTC], firstCommitTime=1441073445445 [Tuesday, September 1, 2015 2:10:45 AM UTC], lastCommitTime=1441926670929 [Thursday, September 10, 2015 11:11:10 PM UTC], commitCounter=53, commitRecordAddr={off=NATIVE:-451550099,len=422}, commitRecordIndexAddr={off=NATIVE:-468869758,len=220}, blockSequence=106022, quorumToken=-1, metaBitsAddr=13435602594695444, metaStartAddr=4614957, storeType=RW, uuid=d64bf2e9-599b-4f41-8bfe-f3b000f73138, offsetBits=42, checksum=371010502, createTime=1441073445016 [Tuesday, September 1, 2015 2:10:45 AM UTC], closeTime=0} com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3126) com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:98) com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3394) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit(BigdataSailRepositoryConnection.java:349) com.blippar.blazegraph.BlazegraphUtils.loadData(BlazegraphUtils.java:446) com.blippar.action.AddAction.execute(AddAction.java:81) com.blippar.servlet.MinervaServlet.doPost(MinervaServlet.java:93) com.blippar.servlet.MinervaServlet.doGet(MinervaServlet.java:60) javax.servlet.http.HttpServlet.service(HttpServlet.java:622) javax.servlet.http.HttpServlet.service(HttpServlet.java:729) org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52) root cause java.lang.RuntimeException: Problem with entry at -1982077125921865306 com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:4909) com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3563) com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:781) com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3489) com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3291) com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4101) com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3124) com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:98) com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3394) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit(BigdataSailRepositoryConnection.java:349) com.blippar.blazegraph.BlazegraphUtils.loadData(BlazegraphUtils.java:446) com.blippar.action.AddAction.execute(AddAction.java:81) com.blippar.servlet.MinervaServlet.doPost(MinervaServlet.java:93) com.blippar.servlet.MinervaServlet.doGet(MinervaServlet.java:60) javax.servlet.http.HttpServlet.service(HttpServlet.java:622) javax.servlet.http.HttpServlet.service(HttpServlet.java:729) org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52) root cause java.lang.RuntimeException: addr=-472185800 : cause=java.lang.IllegalStateException: Bad Address: length requested greater than allocated slot com.bigdata.rwstore.RWStore.getData(RWStore.java:2191) com.bigdata.rwstore.RWStore.getData(RWStore.java:1990) com.bigdata.rwstore.RWStore.getData(RWStore.java:2034) com.bigdata.rwstore.RWStore.getData(RWStore.java:1990) com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:4799) com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:4895) com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3563) com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:781) com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3489) com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3291) com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4101) com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3124) com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:98) com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3394) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit(BigdataSailRepositoryConnection.java:349) com.blippar.blazegraph.BlazegraphUtils.loadData(BlazegraphUtils.java:446) com.blippar.action.AddAction.execute(AddAction.java:81) com.blippar.servlet.MinervaServlet.doPost(MinervaServlet.java:93) com.blippar.servlet.MinervaServlet.doGet(MinervaServlet.java:60) javax.servlet.http.HttpServlet.service(HttpServlet.java:622) javax.servlet.http.HttpServlet.service(HttpServlet.java:729) org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52) root cause java.lang.IllegalStateException: Bad Address: length requested greater than allocated slot com.bigdata.rwstore.RWStore.getData(RWStore.java:2083) com.bigdata.rwstore.RWStore.getData(RWStore.java:1990) com.bigdata.rwstore.RWStore.getData(RWStore.java:2034) com.bigdata.rwstore.RWStore.getData(RWStore.java:1990) com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:4799) com.bigdata.rwstore.RWStore.freeDeferrals(RWStore.java:4895) com.bigdata.rwstore.RWStore.checkDeferredFrees(RWStore.java:3563) com.bigdata.journal.RWStrategy.checkDeferredFrees(RWStrategy.java:781) com.bigdata.journal.AbstractJournal$CommitState.writeCommitRecord(AbstractJournal.java:3489) com.bigdata.journal.AbstractJournal$CommitState.access$2800(AbstractJournal.java:3291) com.bigdata.journal.AbstractJournal.commitNow(AbstractJournal.java:4101) com.bigdata.journal.AbstractJournal.commit(AbstractJournal.java:3124) com.bigdata.rdf.store.LocalTripleStore.commit(LocalTripleStore.java:98) com.bigdata.rdf.sail.BigdataSail$BigdataSailConnection.commit2(BigdataSail.java:3394) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit2(BigdataSailRepositoryConnection.java:330) com.bigdata.rdf.sail.BigdataSailRepositoryConnection.commit(BigdataSailRepositoryConnection.java:349) com.blippar.blazegraph.BlazegraphUtils.loadData(BlazegraphUtils.java:446) com.blippar.action.AddAction.execute(AddAction.java:81) com.blippar.servlet.MinervaServlet.doPost(MinervaServlet.java:93) com.blippar.servlet.MinervaServlet.doGet(MinervaServlet.java:60) javax.servlet.http.HttpServlet.service(HttpServlet.java:622) javax.servlet.http.HttpServlet.service(HttpServlet.java:729) org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52) > On Sep 11, 2015, at 9:15 AM, Brad Bebee <be...@sy...> wrote: > > Joakim, > > Thank you. If you are able to reproduce it, please send as much of the stack trace as you can. > > Thanks, --Brad > > On Fri, Sep 11, 2015 at 12:09 PM, Joakim Soderberg <joa...@bl... <mailto:joa...@bl...>> wrote: > Unfortunately not. I will try to reproduce the error. > > > >> On Sep 11, 2015, at 5:23 AM, Brad Bebee <be...@sy... <mailto:be...@sy...>> wrote: >> >> Joakim, >> >> Can you send us the full stack trace to diagnose this? >> >> Thanks, --Brad >> >> On Thu, Sep 10, 2015 at 8:04 PM, Joakim Soderberg <joa...@bl... <mailto:joa...@bl...>> wrote: >> Hi >> I am running Blazegraph in embedded mode on a CentOS 4-core with 60GB RAM. The jul-file is 280GB hosting 1.3 B triples. While adding triples by adding to a RepositoryConnection >> I get the following error: >> >> HTTP Status 500 - Problem with entry at -1982077125921865306: lastRootBlock=rootBlock{ rootBlock=1, challisField=53, version=3, nextOffset=18367917264487524, localTime=1441926674289 [Thursday, September 10, 2015 11:11:14 PM UTC], firstCommitTime=1441073445445 [Tuesday, September 1, 2015 2:10:45 AM UTC], lastCommitTime=1441926670929 [Thursday, September 10, 2015 11:11:10 PM UTC], commitCounter=53, commitRecordAddr={off=NATIVE:-451550099,len=422}, commitRecordIndexAddr={off=NATIVE:-468869758,len=220}, blockSequence=106022, quorumToken=-1, metaBitsAddr=13435602594695444, metaStartAddr=4614957, storeType=RW, uuid=d64bf2e9-599b-4f41-8bfe-f3b000f73138, offsetBits=42, checksum=371010502, createTime=1441073445016 [Tuesday, September 1, 2015 2:10:45 AM UTC], closeTime=0} >> >> After this I can’t add triples again, could the jnl-file be corrupt now? Can it be repaired? >> >> /Joakim >> >> ------------------------------------------------------------------------------ >> >> _______________________________________________ >> Bigdata-developers mailing list >> Big...@li... <mailto:Big...@li...> >> https://lists.sourceforge.net/lists/listinfo/bigdata-developers <https://lists.sourceforge.net/lists/listinfo/bigdata-developers> >> >> >> >> >> -- >> _______________ >> Brad Bebee >> CEO, Managing Partner >> SYSTAP, LLC >> e: be...@sy... <mailto:be...@sy...> >> m: 202.642.7961 <tel:202.642.7961> >> f: 571.367.5000 <tel:571.367.5000> >> w: www.blazegraph.com <http://www.blazegraph.com/> >> >> Blazegraph™ <http://www.blazegraph.com/> is our ultra high-performance graph database that supports both RDF/SPARQL and Tinkerpop/Blueprints APIs. Mapgraph™ <http://www.systap.com/mapgraph> is our disruptive new technology to use GPUs to accelerate data-parallel graph analytics. >> >> CONFIDENTIALITY NOTICE: This email and its contents and attachments are for the sole use of the intended recipient(s) and are confidential or proprietary to SYSTAP, LLC. Any unauthorized review, use, disclosure, dissemination or copying of this email or its contents or attachments is prohibited. If you have received this communication in error, please notify the sender by reply email and permanently delete all copies of the email and its contents and attachments. >> >> > > > > > -- > _______________ > Brad Bebee > CEO, Managing Partner > SYSTAP, LLC > e: be...@sy... <mailto:be...@sy...> > m: 202.642.7961 > f: 571.367.5000 > w: www.blazegraph.com <http://www.blazegraph.com/> > > Blazegraph™ <http://www.blazegraph.com/> is our ultra high-performance graph database that supports both RDF/SPARQL and Tinkerpop/Blueprints APIs. Mapgraph™ <http://www.systap.com/mapgraph> is our disruptive new technology to use GPUs to accelerate data-parallel graph analytics. > > CONFIDENTIALITY NOTICE: This email and its contents and attachments are for the sole use of the intended recipient(s) and are confidential or proprietary to SYSTAP, LLC. Any unauthorized review, use, disclosure, dissemination or copying of this email or its contents or attachments is prohibited. If you have received this communication in error, please notify the sender by reply email and permanently delete all copies of the email and its contents and attachments. > > |