From: <jer...@us...> - 2013-10-01 20:15:07
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Revision: 7424 http://bigdata.svn.sourceforge.net/bigdata/?rev=7424&view=rev Author: jeremy_carroll Date: 2013-10-01 20:14:59 +0000 (Tue, 01 Oct 2013) Log Message: ----------- Moved and renamed the 500 tests to not just check the optimization step, but also to run the queries Added Paths: ----------- branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/TestNoExceptions.java branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/filterSubselect737.rq branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/nestedSubselectsWithUnion737.rq branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/ticket746.rq Removed Paths: ------------- branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/TestASTOptimizer500s.java branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/filterSubselect737.rq branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/nestedSubselectsWithUnion737.rq branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/ticket746.rq Deleted: branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/TestASTOptimizer500s.java =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/TestASTOptimizer500s.java 2013-10-01 17:57:50 UTC (rev 7423) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/TestASTOptimizer500s.java 2013-10-01 20:14:59 UTC (rev 7424) @@ -1,192 +0,0 @@ -/** - -Copyright (C) SYSTAP, LLC 2006-2013. All rights reserved. - -Contact: - SYSTAP, LLC - 4501 Tower Road - Greensboro, NC 27410 - lic...@bi... - -This program is free software; you can redistribute it and/or modify -it under the terms of the GNU General Public License as published by -the Free Software Foundation; version 2 of the License. - -This program is distributed in the hope that it will be useful, -but WITHOUT ANY WARRANTY; without even the implied warranty of -MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -GNU General Public License for more details. - -You should have received a copy of the GNU General Public License -along with this program; if not, write to the Free Software -Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -*/ -/* - * Created on Oct 1, 2013 - */ - -package com.bigdata.rdf.sparql.ast.optimizers; - -import java.io.IOException; -import java.util.Collection; -import java.util.Iterator; -import java.util.LinkedHashSet; -import java.util.LinkedList; - -import org.apache.commons.io.IOUtils; -import org.openrdf.model.impl.URIImpl; -import org.openrdf.model.vocabulary.RDF; -import org.openrdf.model.vocabulary.RDFS; -import org.openrdf.query.BindingSet; -import org.openrdf.query.MalformedQueryException; -import org.openrdf.query.algebra.StatementPattern.Scope; -import org.openrdf.query.algebra.evaluation.QueryBindingSet; - -import com.bigdata.bop.BOpUtility; -import com.bigdata.bop.IBindingSet; -import com.bigdata.bop.IVariable; -import com.bigdata.bop.Var; -import com.bigdata.bop.bindingSet.EmptyBindingSet; -import com.bigdata.rdf.internal.IV; -import com.bigdata.rdf.sail.sparql.Bigdata2ASTSPARQLParser; -import com.bigdata.rdf.sail.sparql.TestSubqueryPatterns; -import com.bigdata.rdf.sail.sparql.ast.ParseException; -import com.bigdata.rdf.sail.sparql.ast.TokenMgrError; -import com.bigdata.rdf.sparql.ast.ASTContainer; -import com.bigdata.rdf.sparql.ast.AbstractASTEvaluationTestCase; -import com.bigdata.rdf.sparql.ast.ConstantNode; -import com.bigdata.rdf.sparql.ast.IQueryNode; -import com.bigdata.rdf.sparql.ast.JoinGroupNode; -import com.bigdata.rdf.sparql.ast.NamedSubqueriesNode; -import com.bigdata.rdf.sparql.ast.NamedSubqueryInclude; -import com.bigdata.rdf.sparql.ast.NamedSubqueryRoot; -import com.bigdata.rdf.sparql.ast.ProjectionNode; -import com.bigdata.rdf.sparql.ast.QueryRoot; -import com.bigdata.rdf.sparql.ast.QueryType; -import com.bigdata.rdf.sparql.ast.StatementPatternNode; -import com.bigdata.rdf.sparql.ast.StaticAnalysis; -import com.bigdata.rdf.sparql.ast.SubqueryRoot; -import com.bigdata.rdf.sparql.ast.ValueExpressionNode; -import com.bigdata.rdf.sparql.ast.VarNode; -import com.bigdata.rdf.sparql.ast.eval.AST2BOpContext; -import com.bigdata.rdf.vocab.decls.FOAFVocabularyDecl; - -/** - * This test suite is for trac items where the failure mode is a 500 error caused - * by a software error in the static optimizer. - * - * The tests each consist of a test query in a file in this package. - * The typical test succeeds if the optimizers run on this query without a disaster. - * This test suite does NOT have either of the following objectives: - * - that the static optimizer is correct in the sense that the optimized query has the same meaning as the original query - * or - * - an optimizer in the sense that the optimized query is likely to be faster than the original query. - * - * The very limited goal is that no uncaught exceptions are thrown! - * - */ -public class TestASTOptimizer500s extends - AbstractASTEvaluationTestCase { - - /** - * - */ - public TestASTOptimizer500s() { - } - - /** - * @param name - */ - public TestASTOptimizer500s(String name) { - super(name); - } - - - /** - * Unit test for WITH {subquery} AS "name" and INCLUDE. The WITH must be in - * the top-level query. - * - * This is specifically for Trac 746 which crashed out during optimize. - * So the test simply runs that far, and does not verify anything - * other than the ability to optimize without an exception - * @throws IOException - */ - public void test_namedSubquery746() throws MalformedQueryException, - TokenMgrError, ParseException, IOException { - optimizeQuery("ticket746"); - - } - -/** - * <pre> -SELECT * -{ { SELECT * { ?s ?p ?o } LIMIT 1 } - FILTER ( ?s = <eg:a> ) -} - </pre> - * @throws MalformedQueryException - * @throws TokenMgrError - * @throws ParseException - * @throws IOException - */ - public void test_filterSubselect737() throws MalformedQueryException, - TokenMgrError, ParseException, IOException { - optimizeQuery("filterSubselect737"); - - } - - -/** - * <pre> -SELECT * -WHERE { - - { FILTER ( false ) } - UNION - { - { SELECT ?Subject_A - WHERE { - { SELECT $j__5 ?Subject_A - { - } ORDER BY $j__5 - } - } GROUP BY ?Subject_A - } - } - OPTIONAL { - { SELECT ?Subject_A - WHERE { - { SELECT $j__8 ?Subject_A - { - - } ORDER BY $j_8 - } - } GROUP BY ?Subject_A - } - } -} - </pre> - * @throws MalformedQueryException - * @throws TokenMgrError - * @throws ParseException - * @throws IOException - */ - public void test_nestedSubselectsWithUnion737() throws MalformedQueryException, - TokenMgrError, ParseException, IOException { - optimizeQuery("nestedSubselectsWithUnion737"); - - } - - void optimizeQuery(final String queryfile) throws IOException, MalformedQueryException { - final String sparql = IOUtils.toString(getClass().getResourceAsStream(queryfile+".rq")); - - - final QueryRoot ast = new Bigdata2ASTSPARQLParser(store).parseQuery2(sparql,baseURI).getOriginalAST(); - - final IASTOptimizer rewriter = new DefaultOptimizerList(); - - final AST2BOpContext context = new AST2BOpContext(new ASTContainer(ast), store); - rewriter.optimize(context, ast/* queryNode */, new IBindingSet[]{EmptyBindingSet.INSTANCE}); - } - -} Deleted: branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/filterSubselect737.rq =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/filterSubselect737.rq 2013-10-01 17:57:50 UTC (rev 7423) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/filterSubselect737.rq 2013-10-01 20:14:59 UTC (rev 7424) @@ -1,4 +0,0 @@ -SELECT * -{ { SELECT * { ?s ?p ?o } LIMIT 1 } - FILTER ( ?s = <eg:a> ) -} \ No newline at end of file Deleted: branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/nestedSubselectsWithUnion737.rq =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/nestedSubselectsWithUnion737.rq 2013-10-01 17:57:50 UTC (rev 7423) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/nestedSubselectsWithUnion737.rq 2013-10-01 20:14:59 UTC (rev 7424) @@ -1,27 +0,0 @@ -SELECT * -WHERE { - - { FILTER ( false ) } - UNION - { - { SELECT ?Subject_A - WHERE { - { SELECT $j__5 ?Subject_A - { - } ORDER BY $j__5 - } - } GROUP BY ?Subject_A - } - } - OPTIONAL { - { SELECT ?Subject_A - WHERE { - { SELECT $j__8 ?Subject_A - { - - } ORDER BY $j_8 - } - } GROUP BY ?Subject_A - } - } -} \ No newline at end of file Deleted: branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/ticket746.rq =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/ticket746.rq 2013-10-01 17:57:50 UTC (rev 7423) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/ticket746.rq 2013-10-01 20:14:59 UTC (rev 7424) @@ -1,35 +0,0 @@ -base <http://example.org/> -prefix sys: </bdm/api/kbobject/sys:> -prefix base: </bdm/api/kbobject/base:> -prefix syapse: </graph/syapse#> -prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> -prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> - -SELECT * - -WITH { -SELECT * - -WHERE { - - OPTIONAL { - base:disease syapse:hasLiteralProperty $j2 . - ?Sample_A $j2 ?j1 - } - OPTIONAL { - base:species syapse:hasLiteralProperty $j4 . - ?Sample_A $j4 ?j3 - } - OPTIONAL { - ?Sample_A sys:name ?j5 - } - ?Sample_A rdf:type / rdfs:subClassOf * base:MammalianCellLineSample -} - -} AS %__UserQuery - -WHERE { - -INCLUDE %__UserQuery - -} Copied: branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/TestNoExceptions.java (from rev 7423, branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/TestASTOptimizer500s.java) =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/TestNoExceptions.java (rev 0) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/TestNoExceptions.java 2013-10-01 20:14:59 UTC (rev 7424) @@ -0,0 +1,272 @@ +/** + +Copyright (C) SYSTAP, LLC 2006-2013. All rights reserved. + +Contact: + SYSTAP, LLC + 4501 Tower Road + Greensboro, NC 27410 + lic...@bi... + +This program is free software; you can redistribute it and/or modify +it under the terms of the GNU General Public License as published by +the Free Software Foundation; version 2 of the License. + +This program is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU General Public License for more details. + +You should have received a copy of the GNU General Public License +along with this program; if not, write to the Free Software +Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +*/ +/* + * Created on Oct 1, 2013 + */ + +package com.bigdata.rdf.sail; + +import java.io.IOException; +import java.util.Collection; +import java.util.Iterator; +import java.util.LinkedHashSet; +import java.util.LinkedList; +import java.util.Properties; + +import org.apache.commons.io.IOUtils; +import org.openrdf.model.ValueFactory; +import org.openrdf.model.impl.URIImpl; +import org.openrdf.model.vocabulary.RDF; +import org.openrdf.model.vocabulary.RDFS; +import org.openrdf.query.BindingSet; +import org.openrdf.query.MalformedQueryException; +import org.openrdf.query.QueryEvaluationException; +import org.openrdf.query.QueryLanguage; +import org.openrdf.query.TupleQuery; +import org.openrdf.query.TupleQueryResult; +import org.openrdf.query.algebra.StatementPattern.Scope; +import org.openrdf.query.algebra.evaluation.QueryBindingSet; +import org.openrdf.repository.RepositoryConnection; +import org.openrdf.repository.RepositoryException; +import org.openrdf.repository.sail.SailRepository; +import org.openrdf.rio.RDFHandlerException; +import org.openrdf.rio.RDFParseException; +import org.openrdf.sail.memory.MemoryStore; + +import com.bigdata.bop.BOpUtility; +import com.bigdata.bop.IBindingSet; +import com.bigdata.bop.IVariable; +import com.bigdata.bop.Var; +import com.bigdata.bop.bindingSet.EmptyBindingSet; +import com.bigdata.rdf.axioms.NoAxioms; +import com.bigdata.rdf.internal.IV; +import com.bigdata.rdf.sail.sparql.Bigdata2ASTSPARQLParser; +import com.bigdata.rdf.sail.sparql.TestSubqueryPatterns; +import com.bigdata.rdf.sail.sparql.ast.ParseException; +import com.bigdata.rdf.sail.sparql.ast.TokenMgrError; +import com.bigdata.rdf.sparql.ast.ASTContainer; +import com.bigdata.rdf.sparql.ast.AbstractASTEvaluationTestCase; +import com.bigdata.rdf.sparql.ast.ConstantNode; +import com.bigdata.rdf.sparql.ast.IQueryNode; +import com.bigdata.rdf.sparql.ast.JoinGroupNode; +import com.bigdata.rdf.sparql.ast.NamedSubqueriesNode; +import com.bigdata.rdf.sparql.ast.NamedSubqueryInclude; +import com.bigdata.rdf.sparql.ast.NamedSubqueryRoot; +import com.bigdata.rdf.sparql.ast.ProjectionNode; +import com.bigdata.rdf.sparql.ast.QueryRoot; +import com.bigdata.rdf.sparql.ast.QueryType; +import com.bigdata.rdf.sparql.ast.StatementPatternNode; +import com.bigdata.rdf.sparql.ast.StaticAnalysis; +import com.bigdata.rdf.sparql.ast.SubqueryRoot; +import com.bigdata.rdf.sparql.ast.ValueExpressionNode; +import com.bigdata.rdf.sparql.ast.VarNode; +import com.bigdata.rdf.sparql.ast.eval.AST2BOpContext; +import com.bigdata.rdf.sparql.ast.optimizers.DefaultOptimizerList; +import com.bigdata.rdf.sparql.ast.optimizers.IASTOptimizer; +import com.bigdata.rdf.vocab.NoVocabulary; +import com.bigdata.rdf.vocab.decls.FOAFVocabularyDecl; + +/** + * This test suite is for trac items where the failure mode is a 500 error caused + * by a software error, often in the static optimizer. + * + * The tests each consist of a test query in a file in this package. + * The typical test succeeds if the optimizers run on this query without a disaster. + * This test suite does NOT have either of the following objectives: + * - that the static optimizer is correct in the sense that the optimized query has the same meaning as the original query + * or + * - an optimizer in the sense that the optimized query is likely to be faster than the original query. + * + * The very limited goal is that no uncaught exceptions are thrown! + * + */ +public class TestNoExceptions extends + QuadsTestCase { + + /** + * + */ + public TestNoExceptions() { + } + + /** + * @param name + */ + public TestNoExceptions(String name) { + super(name); + } + + public AbstractBigdataSailTestCase getOurDelegate() { + + if (getDelegate() == null) { + + String testClass = System.getProperty("testClass"); + if (testClass != null) { + return super.getOurDelegate(); + + } + setDelegate(new com.bigdata.rdf.sail.TestBigdataSailWithQuads()); + } + return (AbstractBigdataSailTestCase) super.getDelegate(); + } + + /** + * Please set your database properties here, except for your journal file, + * please DO NOT SPECIFY A JOURNAL FILE. + */ + @Override + public Properties getProperties() { + + final Properties props = super.getProperties(); + + /* + * For example, here is a set of five properties that turns off + * inference, truth maintenance, and the free text index. + */ + props.setProperty(BigdataSail.Options.AXIOMS_CLASS, + NoAxioms.class.getName()); + props.setProperty(BigdataSail.Options.VOCABULARY_CLASS, + NoVocabulary.class.getName()); + props.setProperty(BigdataSail.Options.TRUTH_MAINTENANCE, "false"); + props.setProperty(BigdataSail.Options.JUSTIFY, "false"); +// props.setProperty(BigdataSail.Options.INLINE_DATE_TIMES, "true"); +// props.setProperty(BigdataSail.Options.ISOLATABLE_INDICES, "true"); +// props.setProperty(BigdataSail.Options.EXACT_SIZE, "true"); +// props.setProperty(BigdataSail.Options.ALLOW_SESAME_QUERY_EVALUATION, +// "false"); + props.setProperty(BigdataSail.Options.STATEMENT_IDENTIFIERS, "false"); + + return props; + + } + /** + * Unit test for WITH {subquery} AS "name" and INCLUDE. The WITH must be in + * the top-level query. + * + * This is specifically for Trac 746 which crashed out during optimize. + * So the test simply runs that far, and does not verify anything + * other than the ability to optimize without an exception + * @throws IOException + */ + public void test_namedSubquery746() throws Exception, + TokenMgrError, ParseException, IOException { + optimizeQuery("ticket746"); + + } + +/** + * <pre> +SELECT * +{ { SELECT * { ?s ?p ?o } LIMIT 1 } + FILTER ( ?s = <eg:a> ) +} + </pre> + * @throws MalformedQueryException + * @throws TokenMgrError + * @throws ParseException + * @throws IOException + */ + public void test_filterSubselect737() throws Exception, + TokenMgrError, ParseException, IOException { + optimizeQuery("filterSubselect737"); + + } + + +/** + * <pre> +SELECT * +WHERE { + + { FILTER ( false ) } + UNION + { + { SELECT ?Subject_A + WHERE { + { SELECT $j__5 ?Subject_A + { + } ORDER BY $j__5 + } + } GROUP BY ?Subject_A + } + } + OPTIONAL { + { SELECT ?Subject_A + WHERE { + { SELECT $j__8 ?Subject_A + { + + } ORDER BY $j_8 + } + } GROUP BY ?Subject_A + } + } +} + </pre> + * @throws MalformedQueryException + * @throws TokenMgrError + * @throws ParseException + * @throws IOException + */ + public void test_nestedSubselectsWithUnion737() throws Exception, + TokenMgrError, ParseException, IOException { + optimizeQuery("nestedSubselectsWithUnion737"); + + } + + void optimizeQuery(final String queryfile) throws Exception { + final String sparql = IOUtils.toString(getClass().getResourceAsStream(queryfile+".rq")); + // try with Bigdata: + final BigdataSail sail = getSail(); + try { + executeQuery(new BigdataSailRepository(sail),sparql); + } finally { + sail.__tearDownUnitTest(); + } + + } + + private void executeQuery(final SailRepository repo, final String query) + throws RepositoryException, MalformedQueryException, + QueryEvaluationException, RDFParseException, IOException, + RDFHandlerException { + try { + repo.initialize(); + final RepositoryConnection conn = repo.getConnection(); + conn.setAutoCommit(false); + try { + final ValueFactory vf = conn.getValueFactory(); + conn.commit(); + TupleQuery tq = conn.prepareTupleQuery(QueryLanguage.SPARQL, query); + TupleQueryResult tqr = tq.evaluate(); + tqr.close(); + } finally { + conn.close(); + } + } finally { + repo.shutDown(); + } + } + +} Copied: branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/filterSubselect737.rq (from rev 7423, branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/filterSubselect737.rq) =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/filterSubselect737.rq (rev 0) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/filterSubselect737.rq 2013-10-01 20:14:59 UTC (rev 7424) @@ -0,0 +1,4 @@ +SELECT * +{ { SELECT * { ?s ?p ?o } LIMIT 1 } + FILTER ( ?s = <eg:a> ) +} \ No newline at end of file Copied: branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/nestedSubselectsWithUnion737.rq (from rev 7423, branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/nestedSubselectsWithUnion737.rq) =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/nestedSubselectsWithUnion737.rq (rev 0) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/nestedSubselectsWithUnion737.rq 2013-10-01 20:14:59 UTC (rev 7424) @@ -0,0 +1,27 @@ +SELECT * +WHERE { + + { FILTER ( false ) } + UNION + { + { SELECT ?Subject_A + WHERE { + { SELECT $j__5 ?Subject_A + { + } ORDER BY $j__5 + } + } GROUP BY ?Subject_A + } + } + OPTIONAL { + { SELECT ?Subject_A + WHERE { + { SELECT $j__8 ?Subject_A + { + + } ORDER BY $j_8 + } + } GROUP BY ?Subject_A + } + } +} \ No newline at end of file Copied: branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/ticket746.rq (from rev 7423, branches/BIGDATA_RELEASE_1_3_0/bigdata-rdf/src/test/com/bigdata/rdf/sparql/ast/optimizers/ticket746.rq) =================================================================== --- branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/ticket746.rq (rev 0) +++ branches/BIGDATA_RELEASE_1_3_0/bigdata-sails/src/test/com/bigdata/rdf/sail/ticket746.rq 2013-10-01 20:14:59 UTC (rev 7424) @@ -0,0 +1,35 @@ +base <http://example.org/> +prefix sys: </bdm/api/kbobject/sys:> +prefix base: </bdm/api/kbobject/base:> +prefix syapse: </graph/syapse#> +prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> +prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> + +SELECT * + +WITH { +SELECT * + +WHERE { + + OPTIONAL { + base:disease syapse:hasLiteralProperty $j2 . + ?Sample_A $j2 ?j1 + } + OPTIONAL { + base:species syapse:hasLiteralProperty $j4 . + ?Sample_A $j4 ?j3 + } + OPTIONAL { + ?Sample_A sys:name ?j5 + } + ?Sample_A rdf:type / rdfs:subClassOf * base:MammalianCellLineSample +} + +} AS %__UserQuery + +WHERE { + +INCLUDE %__UserQuery + +} This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |