Recent changes to Main_Page

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 13:16:34 -0000

--- v43
+++ v44
@@ -33,7 +33,7 @@

 ## Read Clear Canvas Studies, Introduction

-The hospital is using [Clear Canvas](http://www.clearcanvas.ca/dnn/) to store studies. While Clear Canvas has some ability to activate Fiji, it is fairly limited. This plugin allows the parsing of the Clear Canvas xml files to allow a direct read of their stored DICOM files, without the necessity of first reading in the files into their software. In particular, this plugin will read the Clear Canvas data into Fiji and will automatically launch Pet-Ct Viewer if the data is suitable for it. A more detailed explanation is [here](Clear Canvas Dialog) 
+The hospital considered using [Clear Canvas](http://www.clearcanvas.ca/dnn/) to store studies. While Clear Canvas has some ability to activate Fiji, it is fairly limited. This plugin allows the parsing of the Clear Canvas xml files to allow a direct read of their stored DICOM files, without the necessity of first reading in the files into their software. In particular, this plugin will read the Clear Canvas data into Fiji and will automatically launch Pet-Ct Viewer if the data is suitable for it. A more detailed explanation is [here](Clear Canvas Dialog) 

 ## Nuclear Medicine analysis

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 07:04:04 -0000

--- v42
+++ v43
@@ -27,7 +27,7 @@

 You can choose which program will start whenever you restart Fiji.
 [[img src=startup.png]] 
-Usually Read from CD is chosen, but another common choice is Read BI Studies which is used when reading from the Orthanc server. If you are using Fiji primarily for microscopy of something else, you may prefer the choice of None.
+Usually Read from CD is chosen, but another common choice is Read BI Studies which is used when reading from the Orthanc server. If you are using Fiji primarily for microscopy or something else, you may prefer the choice of None.

 To setup the choice go to Fiji -> Plugins -> Nuclear Medicine -> Choose Startup Program...

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 07:01:17 -0000

--- v41
+++ v42
@@ -27,7 +27,7 @@

 You can choose which program will start whenever you restart Fiji.
 [[img src=startup.png]] 
-Usually Read from CD is chosen, but another common choice is Read BI Studies which is used when reading from the Orthanc database. If you are using Fiji primarily for microscopy of something else, you may prefer the choice of None.
+Usually Read from CD is chosen, but another common choice is Read BI Studies which is used when reading from the Orthanc server. If you are using Fiji primarily for microscopy of something else, you may prefer the choice of None.

 To setup the choice go to Fiji -> Plugins -> Nuclear Medicine -> Choose Startup Program...

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 06:58:43 -0000

--- v40
+++ v41
@@ -21,7 +21,7 @@

 ## Read BI database, Introduction

-At Beth Israel there is a miniPACS used to read, write and delete studies and reports. The presentation of studies is similar to Read CD and it will automatically bring up the Pet-Ct Viewer if the data read corresponds to a Pet-Ct study. A more detailed explanation is [here](Reading studies). 
+At Beth Israel there is a miniPACS used to read, write and delete studies and reports. Outside BI the [Orthanc server](Orthanc)  is more common. The presentation of studies is similar to Read CD and it will automatically bring up the Pet-Ct Viewer if the data read corresponds to a Pet-Ct study. A more detailed explanation is [here](Reading studies) or at [Orthanc server](Orthanc). 

 ## Choose Fiji Startup program

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 06:44:58 -0000

--- v39
+++ v40
@@ -27,9 +27,9 @@

 You can choose which program will start whenever you restart Fiji.
 [[img src=startup.png]] 
-Usually Read from CD is chosen, but another common choice is Read BI database which is used when read from the Orthanc database. If you are using Fiji primarily for microscopy of something else, you may prefer the choice of none.
+Usually Read from CD is chosen, but another common choice is Read BI Studies which is used when reading from the Orthanc database. If you are using Fiji primarily for microscopy of something else, you may prefer the choice of None.

-To setup the choice go to Fiji -> Plugins -> Nuclear Medicine -> Choose startup program...
+To setup the choice go to Fiji -> Plugins -> Nuclear Medicine -> Choose Startup Program...

 ## Read Clear Canvas Studies, Introduction

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 06:40:02 -0000

--- v38
+++ v39
@@ -27,6 +27,10 @@

 You can choose which program will start whenever you restart Fiji.
 [[img src=startup.png]] 
+Usually Read from CD is chosen, but another common choice is Read BI database which is used when read from the Orthanc database. If you are using Fiji primarily for microscopy of something else, you may prefer the choice of none.
+
+To setup the choice go to Fiji -> Plugins -> Nuclear Medicine -> Choose startup program...
+
 ## Read Clear Canvas Studies, Introduction

 The hospital is using [Clear Canvas](http://www.clearcanvas.ca/dnn/) to store studies. While Clear Canvas has some ability to activate Fiji, it is fairly limited. This plugin allows the parsing of the Clear Canvas xml files to allow a direct read of their stored DICOM files, without the necessity of first reading in the files into their software. In particular, this plugin will read the Clear Canvas data into Fiji and will automatically launch Pet-Ct Viewer if the data is suitable for it. A more detailed explanation is [here](Clear Canvas Dialog)

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 06:33:16 -0000

--- v37
+++ v38
@@ -26,7 +26,7 @@
 ## Choose Fiji Startup program

 You can choose which program will start whenever you restart Fiji.
-[[img src=startup.jpg]] 
+[[img src=startup.png]] 
 ## Read Clear Canvas Studies, Introduction

 The hospital is using [Clear Canvas](http://www.clearcanvas.ca/dnn/) to store studies. While Clear Canvas has some ability to activate Fiji, it is fairly limited. This plugin allows the parsing of the Clear Canvas xml files to allow a direct read of their stored DICOM files, without the necessity of first reading in the files into their software. In particular, this plugin will read the Clear Canvas data into Fiji and will automatically launch Pet-Ct Viewer if the data is suitable for it. A more detailed explanation is [here](Clear Canvas Dialog)

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 06:32:16 -0000

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 06:31:13 -0000

--- v35
+++ v36
@@ -26,7 +26,7 @@
 ## Choose Fiji Startup program

 You can choose which program will start whenever you restart Fiji.
-
+[[img src=startup.jpg]] 
 ## Read Clear Canvas Studies, Introduction

 The hospital is using [Clear Canvas](http://www.clearcanvas.ca/dnn/) to store studies. While Clear Canvas has some ability to activate Fiji, it is fairly limited. This plugin allows the parsing of the Clear Canvas xml files to allow a direct read of their stored DICOM files, without the necessity of first reading in the files into their software. In particular, this plugin will read the Clear Canvas data into Fiji and will automatically launch Pet-Ct Viewer if the data is suitable for it. A more detailed explanation is [here](Clear Canvas Dialog)

Main_Page modified by Ilan Tal

Ilan Tal — Sun, 02 Jun 2019 06:28:43 -0000

--- v34
+++ v35
@@ -23,6 +23,10 @@

 At Beth Israel there is a miniPACS used to read, write and delete studies and reports. The presentation of studies is similar to Read CD and it will automatically bring up the Pet-Ct Viewer if the data read corresponds to a Pet-Ct study. A more detailed explanation is [here](Reading studies). 

+## Choose Fiji Startup program
+
+You can choose which program will start whenever you restart Fiji.
+
 ## Read Clear Canvas Studies, Introduction

 The hospital is using [Clear Canvas](http://www.clearcanvas.ca/dnn/) to store studies. While Clear Canvas has some ability to activate Fiji, it is fairly limited. This plugin allows the parsing of the Clear Canvas xml files to allow a direct read of their stored DICOM files, without the necessity of first reading in the files into their software. In particular, this plugin will read the Clear Canvas data into Fiji and will automatically launch Pet-Ct Viewer if the data is suitable for it. A more detailed explanation is [here](Clear Canvas Dialog)