File	Date	Author	Commit
www	2018-03-28	jszlek	[34ce74] First commit
BEMoDA_auxiliary_functions.R	2018-03-28	jszlek	[34ce74] First commit
BEMoDA_shiny_Dep.R	2018-03-28	jszlek	[34ce74] First commit
BEMoDA_shiny_InDep.R	2018-03-28	jszlek	[34ce74] First commit
Help.html	2018-03-28	jszlek	[34ce74] First commit
README.TXT	2018-03-28	jszlek	[34ce74] First commit
app.R	2018-03-28	jszlek	[34ce74] First commit
gpl-3.0-standalone.html	2018-03-28	jszlek	[34ce74] First commit
license_GNU_GPL_3_0.txt	2018-03-28	jszlek	[34ce74] First commit
m_ref.csv	2018-03-28	jszlek	[34ce74] First commit
m_test.csv	2018-03-28	jszlek	[34ce74] First commit
run_BEMoDA_Dep_Win.bat	2018-03-28	jszlek	[34ce74] First commit
run_BEMoDA_shiny.R	2018-03-28	jszlek	[34ce74] First commit
run_BEMoDA_shiny.sh	2018-03-28	jszlek	[34ce74] First commit
std1.csv	2018-03-28	jszlek	[34ce74] First commit
std2.csv	2018-03-28	jszlek	[34ce74] First commit
std3.csv	2018-03-28	jszlek	[34ce74] First commit

Read Me

/**
*
* BEMoDA shiny v1.0 - Bioequivalence Model Dependent-Independent Approach application for in-vitro dissolution profile comparison
Copyright (C) 2017 Jakub Szlęk, Aleksander Mendyk

Authors: 
Jakub Szlęk, Aleksander Mendyk

Affiliation: 
Jagiellonian University Medical College,
Faculty of Pharmacy,
Department of Pharmaceucial Technology and Biopharmaceutics,
Medyczna 9 st.,
30-688 Kraków
Poland

Bugs, issues, please e-mail to maintainer
Jakub Szlęk: j.szlek@uj.edu.pl

Copyright (C) 2017 Jakub Szlęk, Aleksander Mendyk

This program is free software: you can redistribute it and/or modify it under the terms of the GNU General 
Public License as published by the Free Software Foundation, either version 3 of the License,
or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program.
If not, see <http://www.gnu.org/licenses/>.

========================
REQUIREMENTS
========================
1) R environment version >= 3.3.0 (for download check https://cran.r-project.org/)
2) Additional R packages: shiny, DT, shinyBS, dplyr, optimx, ggplot2, nloptr, GenSA, MASS, reshape, gridExtra

Note: Please ensure that nlopt libraries (https://nlopt.readthedocs.io/en/latest/) are installed on your system.
If you encounter troubles installing nlopt please read the StackOverflow question https://stackoverflow.com/questions/29716857/installing-nloptr-on-linux

========================
INSTALLATION AND RUNNING
========================

1) Download the tar.gz archive from the https://sourceforge.net/projects/bemoda_shiny/
2) Unpack downloaded package (on linux-like systems use "tar xzvf BEMoDA_shiny.tar.gz -C /path/to/my/BEMoDA_shiny/folder")
3) Run the konsole/terminal or cmd.exe
4) Navigate to the folder (on linux-like systems use "cd /path/to/my/BEMoDA_shiny/folder")
5) On Windows run the run_R.bat file or on linux-like systems run run_R.sh (make sure the *.bat or *.sh files are executable)

Alternativley:
5) Run R console (on linux type "R", on Windows 
6) Check if you are in the folder by typing "getwd()" in R console
7) Load shiny library by typing "library(shiny)"
8) Run the shiny application by typing "runApp()"
9) This command should run the app in a browser

*
*
**/