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From: <tr...@us...> - 2003-02-15 11:29:10
|
Update of /cvsroot/basedb/basedb/include/classes In directory sc8-pr-cvs1:/tmp/cvs-serv20384/include/classes Modified Files: item.inc.php news.inc.php raw.inc.php reporterlist.inc.php user.inc.php Log Message: Fixed problems that were found while running as non-superuser Index: item.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/item.inc.php,v retrieving revision 1.21 retrieving revision 1.22 diff -C2 -d -r1.21 -r1.22 *** item.inc.php 2 Feb 2003 15:31:51 -0000 1.21 --- item.inc.php 15 Feb 2003 11:29:06 -0000 1.22 *************** *** 303,311 **** } ! // Returns an array with (name,removed,owner), plus // gid,groupAccess,worldAccess if $sharing is true. function getBasicFromId($type, $id, $sharing = true) { ! $query = "SELECT name, removed, owner". ($sharing ? ", gid, `groupAccess`, `worldAccess`" : ""). " FROM $type WHERE id = ".(int)$id; --- 303,311 ---- } ! // Returns an array with (id,name,removed,owner), plus // gid,groupAccess,worldAccess if $sharing is true. function getBasicFromId($type, $id, $sharing = true) { ! $query = "SELECT id, name, removed, owner". ($sharing ? ", gid, `groupAccess`, `worldAccess`" : ""). " FROM $type WHERE id = ".(int)$id; Index: news.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/news.inc.php,v retrieving revision 1.6 retrieving revision 1.7 diff -C2 -d -r1.6 -r1.7 *** news.inc.php 30 Dec 2002 22:09:16 -0000 1.6 --- news.inc.php 15 Feb 2003 11:29:07 -0000 1.7 *************** *** 74,78 **** $query = "SELECT COUNT(*) FROM News n ". ! "WHERE ".db_true()." ".$search->getWhere(); $res = query($query); if($row =& db_fetch_row($res)) $cnt = $row[0]; --- 74,79 ---- $query = "SELECT COUNT(*) FROM News n ". ! "WHERE ".Item::whereRemoved("n", 0)." ". ! $search->getWhere(); $res = query($query); if($row =& db_fetch_row($res)) $cnt = $row[0]; *************** *** 92,96 **** $query = "SELECT n.*, ug.`name` AS `userName` ". "FROM News n, UserGroup ug ". ! "WHERE n.owner = ug.id"; $search->getWhere()." $ob ".$search->makeLimit(); --- 93,98 ---- $query = "SELECT n.*, ug.`name` AS `userName` ". "FROM News n, UserGroup ug ". ! "WHERE n.owner = ug.id ". ! Item::whereRemovedAnd("n", 0)." ". $search->getWhere()." $ob ".$search->makeLimit(); Index: raw.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/raw.inc.php,v retrieving revision 1.27 retrieving revision 1.28 diff -C2 -d -r1.27 -r1.28 *** raw.inc.php 3 Feb 2003 20:13:18 -0000 1.27 --- raw.inc.php 15 Feb 2003 11:29:07 -0000 1.28 *************** *** 346,349 **** --- 346,350 ---- $search->makeWhere($fields); $search->addExtraWhere(Item::whereRemoved("r", $removed)); + $search->addExtraWhere(Item::whereShared("r", $user)); if($expid) { Index: reporterlist.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/reporterlist.inc.php,v retrieving revision 1.11 retrieving revision 1.12 diff -C2 -d -r1.11 -r1.12 *** reporterlist.inc.php 30 Jan 2003 16:45:21 -0000 1.11 --- reporterlist.inc.php 15 Feb 2003 11:29:07 -0000 1.12 *************** *** 389,393 **** } ! } --- 389,396 ---- } ! function isShared($user, $write = 0) ! { ! return Experiment::isSharedId($this->experiment, $user, $write); ! } } Index: user.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/user.inc.php,v retrieving revision 1.24 retrieving revision 1.25 diff -C2 -d -r1.24 -r1.25 *** user.inc.php 4 Feb 2003 18:28:59 -0000 1.24 --- user.inc.php 15 Feb 2003 11:29:07 -0000 1.25 *************** *** 248,252 **** } ! // Superusers can edit anyone, but cannot be edited by normal user admins. function mayEdit(&$user) { --- 248,252 ---- } ! /* // Superusers can edit anyone, but cannot be edited by normal user admins. function mayEdit(&$user) { *************** *** 262,265 **** --- 262,278 ---- { return $this->mayEdit($user); + }*/ + + // Superusers can edit anyone, but cannot be edited by normal user admins. + function isShared($user, $write = 0) + { + $acc = (int)$write; + if(!$acc) + { + return $user->access($this->globalRead()); + } + return $user->access(BUA_SUPERUSER) || + $user->access($this->globalEdit()) && + !$this->access(BUA_SUPERUSER); } } |
From: <tr...@us...> - 2003-02-15 11:29:10
|
Update of /cvsroot/basedb/basedb/include/common In directory sc8-pr-cvs1:/tmp/cvs-serv20384/include/common Modified Files: misc.inc.php Log Message: Fixed problems that were found while running as non-superuser Index: misc.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/common/misc.inc.php,v retrieving revision 1.17 retrieving revision 1.18 diff -C2 -d -r1.17 -r1.18 *** misc.inc.php 28 Jan 2003 14:19:15 -0000 1.17 --- misc.inc.php 15 Feb 2003 11:29:07 -0000 1.18 *************** *** 264,269 **** { $r = 0x0; ! $b = 0x10; ! $g = 0x98; $ra = -$ra; } --- 264,269 ---- { $r = 0x0; ! $b = 0x00; ! $g = 0xb8; $ra = -$ra; } |
From: <tr...@us...> - 2003-02-15 11:28:29
|
Update of /cvsroot/basedb/basedb/www In directory sc8-pr-cvs1:/tmp/cvs-serv20227/www Modified Files: news_edit.phtml Log Message: Changed to new structure Index: news_edit.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/news_edit.phtml,v retrieving revision 1.17 retrieving revision 1.18 diff -C2 -d -r1.17 -r1.18 *** news_edit.phtml 2 Feb 2003 15:31:52 -0000 1.17 --- news_edit.phtml 15 Feb 2003 11:28:27 -0000 1.18 *************** *** 30,75 **** setLocation("news_list.phtml"); ! $edit = true; $err = ""; ! if(isset($i_ok)) { ! $news = new News(); ! if($i_n > 0) ! { ! if(!$news->read($i_n)) $err = "No such news item"; [...86 lines suppressed...] ! } ! $edit = false; } } if($edit) $what = $newsid ? "Edit" : "New"; *************** *** 84,88 **** ?>">Return</a></td></tr> <? ! if($err) echo "<tr><td colspan=2 class=red>Error: $err</td></tr>\n"; if($edit) --- 93,98 ---- ?>">Return</a></td></tr> <? ! if($err) ! echo "<tr><td colspan=2 class=red>Error: $err</td></tr>\n"; if($edit) |
From: <tr...@us...> - 2003-02-15 11:27:56
|
Update of /cvsroot/basedb/basedb/src In directory sc8-pr-cvs1:/tmp/cvs-serv20056/src Modified Files: ftpdspawner.cc Log Message: changed includes Index: ftpdspawner.cc =================================================================== RCS file: /cvsroot/basedb/basedb/src/ftpdspawner.cc,v retrieving revision 1.1 retrieving revision 1.2 diff -C2 -d -r1.1 -r1.2 *** ftpdspawner.cc 1 Feb 2003 12:52:53 -0000 1.1 --- ftpdspawner.cc 15 Feb 2003 11:27:52 -0000 1.2 *************** *** 24,28 **** #include <stdlib.h> #include <sys/socket.h> - #include <sys/signal.h> #include <sys/wait.h> #include <errno.h> --- 24,27 ---- *************** *** 31,34 **** --- 30,34 ---- #include <unistd.h> #include <stdarg.h> + #include <signal.h> void cleanup(int errcode,char *errmsg,...) *************** *** 66,70 **** } ! int moomoo(char **command, int fd, struct sockaddr_in *sa) { char *a = inet_ntoa(sa->sin_addr); --- 66,70 ---- } ! int runprogram(char **command, int fd, struct sockaddr_in *sa) { char *a = inet_ntoa(sa->sin_addr); *************** *** 111,115 **** if(sock < 0) cleanup(10, "accept failed: %s\n", strerror(errno)); ! moomoo(&argv[2], sock, &saddr); close(sock); } --- 111,115 ---- if(sock < 0) cleanup(10, "accept failed: %s\n", strerror(errno)); ! runprogram(&argv[2], sock, &saddr); close(sock); } |
From: <tr...@us...> - 2003-02-13 22:30:13
|
Update of /cvsroot/basedb/basedb/include/web In directory sc8-pr-cvs1:/tmp/cvs-serv4457/include/web Modified Files: hyb_common.inc.php probe_common.inc.php Log Message: Fixes soon after 1.2.0RC2... Index: hyb_common.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/web/hyb_common.inc.php,v retrieving revision 1.11 retrieving revision 1.12 diff -C2 -d -r1.11 -r1.12 *** hyb_common.inc.php 13 Feb 2003 11:36:52 -0000 1.11 --- hyb_common.inc.php 13 Feb 2003 22:29:36 -0000 1.12 *************** *** 136,140 **** return "Unable to use image for JPEG: image not found"; $ch = $img->getChannels(); ! if($ch != -1 && $ch != 1 && $ch != 2) return "Unable to use image for JPEG: can't handle its channel(s)"; else if(!$img->takeOverUseForJpeg()) --- 136,140 ---- return "Unable to use image for JPEG: image not found"; $ch = $img->getChannels(); ! if($ch != 1 && $ch != 2 && $ch != IMAGE_CHANNEL_BOTH) return "Unable to use image for JPEG: can't handle its channel(s)"; else if(!$img->takeOverUseForJpeg()) *************** *** 213,218 **** "',".($un ? 1 : 0).")\">". ($un ? "Undelete" : "Delete")."</a>]"; ! ! if($a["channels"] > 0) { $func[] = "[<a href='javascript:useForJpeg($a[id])'>". --- 213,218 ---- "',".($un ? 1 : 0).")\">". ($un ? "Undelete" : "Delete")."</a>]"; ! ! if($ch == 1 || $ch == 2 || $ch == IMAGE_CHANNEL_BOTH) { $func[] = "[<a href='javascript:useForJpeg($a[id])'>". Index: probe_common.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/web/probe_common.inc.php,v retrieving revision 1.2 retrieving revision 1.3 diff -C2 -d -r1.2 -r1.3 *** probe_common.inc.php 30 Dec 2002 22:09:17 -0000 1.2 --- probe_common.inc.php 13 Feb 2003 22:29:36 -0000 1.3 *************** *** 36,41 **** $bgcolor ^= 1; $w =& $wells[$wellid]; ! if($wellid == $curWell) echo "<tr class=pink>"; ! else echo "<tr bgcolor=$tdbg[$bgcolor]>"; $plink = html($w["name"]); --- 36,43 ---- $bgcolor ^= 1; $w =& $wells[$wellid]; ! if($wellid == $curWell) ! echo "<tr class=pink>"; ! else ! echo "<tr bgcolor=$tdbg[$bgcolor]>"; $plink = html($w["name"]); *************** *** 50,54 **** "<td>".html($w["bacterialGrowth"])."</td>". "<td>".html($w["comment"])."</td></tr>\n"; ! if(!isset($children[$wellid])) return; $c =& $children[$wellid]; for($i = 0; $i < count($c); $i++) --- 52,57 ---- "<td>".html($w["bacterialGrowth"])."</td>". "<td>".html($w["comment"])."</td></tr>\n"; ! if(!isset($children[$wellid])) ! return; $c =& $children[$wellid]; for($i = 0; $i < count($c); $i++) |
From: <tr...@us...> - 2003-02-13 22:30:13
|
Update of /cvsroot/basedb/basedb/include/classes In directory sc8-pr-cvs1:/tmp/cvs-serv4457/include/classes Modified Files: acquisition.inc.php image.inc.php spotimage.inc.php Log Message: Fixes soon after 1.2.0RC2... Index: acquisition.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/acquisition.inc.php,v retrieving revision 1.14 retrieving revision 1.15 diff -C2 -d -r1.14 -r1.15 *** acquisition.inc.php 13 Feb 2003 11:36:52 -0000 1.14 --- acquisition.inc.php 13 Feb 2003 22:29:35 -0000 1.15 *************** *** 178,183 **** } ! // Returns true if this acquisition has what it takes for a spot JPEG ! // to be created. function canCreateJpegImage() { --- 178,184 ---- } ! // Returns non-0 if this acquisition has what it takes for a spot JPEG ! // to be created. 1 means that there are two tiffs, 2 that there is one ! // with both channels function canCreateJpegImage() { *************** *** 192,198 **** $arr[] = $row[0]; if(count($arr) == 1 && $arr[0] == IMAGE_CHANNEL_BOTH) ! return true; if(count($arr) == 2 && $arr[0] == 1 && $arr[1] == 2) ! return true; return false; } --- 193,199 ---- $arr[] = $row[0]; if(count($arr) == 1 && $arr[0] == IMAGE_CHANNEL_BOTH) ! return 2; if(count($arr) == 2 && $arr[0] == 1 && $arr[1] == 2) ! return 1; return false; } Index: image.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/image.inc.php,v retrieving revision 1.15 retrieving revision 1.16 diff -C2 -d -r1.15 -r1.16 *** image.inc.php 13 Feb 2003 11:36:52 -0000 1.15 --- image.inc.php 13 Feb 2003 22:29:35 -0000 1.16 *************** *** 200,207 **** function takeOverUseForJpeg() { ! if($this->channels == -3) $andchan = ""; else if($this->channels == 1 || $this->channels == 2) ! $andchan = "AND channels = $this->channels"; else return false; --- 200,207 ---- function takeOverUseForJpeg() { ! if($this->channels == IMAGE_CHANNEL_BOTH) $andchan = ""; else if($this->channels == 1 || $this->channels == 2) ! $andchan = "AND channels <> ".(3 - $this->channels); else return false; Index: spotimage.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/spotimage.inc.php,v retrieving revision 1.10 retrieving revision 1.11 diff -C2 -d -r1.10 -r1.11 *** spotimage.inc.php 13 Feb 2003 11:36:52 -0000 1.10 --- spotimage.inc.php 13 Feb 2003 22:29:35 -0000 1.11 *************** *** 24,27 **** --- 24,28 ---- require_once("raw.inc.php"); require_once("image.inc.php"); + require_once("plate.inc.php"); *************** *** 99,103 **** // $imgs is an array with either two images (keys 1 and 2) or one image // (key IMAGE_CHANNEL_BOTH). [...65 lines suppressed...] global $BC; --- 179,183 ---- // Returns an error message ! function createSpotImages($skiptiffs = 0) { global $BC; *************** *** 203,207 **** $err = "Spot image directory error"; else ! $err = $this->runSpotImageChopper($dir, $imgs); if($err != "") --- 207,211 ---- $err = "Spot image directory error"; else ! $err = $this->runSpotImageChopper($dir, $imgs, $skiptiffs); if($err != "") |
Update of /cvsroot/basedb/basedb/www In directory sc8-pr-cvs1:/tmp/cvs-serv4457/www Modified Files: gene_explore.phtml hyb_edit.phtml hyb_result.phtml raw_makeimages.phtml raw_table.phtml test.phtml Log Message: Fixes soon after 1.2.0RC2... Index: gene_explore.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/gene_explore.phtml,v retrieving revision 1.72 retrieving revision 1.73 diff -C2 -d -r1.72 -r1.73 *** gene_explore.phtml 11 Feb 2003 14:43:57 -0000 1.72 --- gene_explore.phtml 13 Feb 2003 22:29:37 -0000 1.73 *************** *** 151,154 **** --- 151,159 ---- ?>&oldlocation=<?= urlencode($location) ?>&i_filt="+filt; } + function exploreGene() + { + document.ff.i_gsearch.value=0; + document.ff.submit(); + } </script> <? Index: hyb_edit.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/hyb_edit.phtml,v retrieving revision 1.53 retrieving revision 1.54 diff -C2 -d -r1.53 -r1.54 *** hyb_edit.phtml 13 Feb 2003 08:47:47 -0000 1.53 --- hyb_edit.phtml 13 Feb 2003 22:29:37 -0000 1.54 *************** *** 189,193 **** // New labeled extracts to associate? ! for($ch = 1; $ch < $maxch && $err == ""; $ch++) { if(!isset($i_lext[$ch])) --- 189,193 ---- // New labeled extracts to associate? ! for($ch = 1; $ch <= $maxch && $err == ""; $ch++) { if(!isset($i_lext[$ch])) Index: hyb_result.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/hyb_result.phtml,v retrieving revision 1.73 retrieving revision 1.74 diff -C2 -d -r1.73 -r1.74 *** hyb_result.phtml 2 Feb 2003 15:31:52 -0000 1.73 --- hyb_result.phtml 13 Feb 2003 22:29:38 -0000 1.74 *************** *** 411,414 **** --- 411,415 ---- } $rep = new Reporter(); + $arr[$rawcolcnt] = $rid; // For the prefix $rep->setAllFromArray($arr, $rawcolcnt); if(!$rep->write()) *************** *** 446,449 **** --- 447,458 ---- $atid = 0; $atmaptype = 0; + + if(!$noarray) + { + $arr = ArraySlide::getBriefForHyb($hyb->getId(), $curUser); + if(!$arr) + $noarray = true; + } + if(!$noarray) { Index: raw_makeimages.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/raw_makeimages.phtml,v retrieving revision 1.3 retrieving revision 1.4 diff -C2 -d -r1.3 -r1.4 *** raw_makeimages.phtml 13 Feb 2003 11:36:53 -0000 1.3 --- raw_makeimages.phtml 13 Feb 2003 22:29:38 -0000 1.4 *************** *** 73,82 **** $spi = new SpotImage($raw); // States: need to clear, need to choose images, set parameters, done $state = 2; if($raw->getHasSpotImages() == 1) $state = 0; ! else if(!$acq->canCreateJpegImage()) $state = 1; --- 73,85 ---- $spi = new SpotImage($raw); + $skiptiffs = isset($i_skiptiffs) ? (int)$i_skiptiffs : 0; + // States: need to clear, need to choose images, set parameters, done $state = 2; + $tifftype = 0; if($raw->getHasSpotImages() == 1) $state = 0; ! else if(!($tifftype = $acq->canCreateJpegImage())) $state = 1; *************** *** 85,89 **** if(!$spi->removeSpotImages()) $err = "Unable to remove existing spot images"; ! else if(!$acq->canCreateJpegImage()) $state = 1; else --- 88,92 ---- if(!$spi->removeSpotImages()) $err = "Unable to remove existing spot images"; ! else if(!($tifftype = $acq->canCreateJpegImage())) $state = 1; else *************** *** 123,126 **** --- 126,134 ---- $header = $raw->getFileHeader(); $spi->updateSpotInfoFromHeader($header, false); + if($tifftype == 2) + { + if(strpos($header, "Scanner=GenePix 4000A") !== false) + $skiptiffs = 2; + } } } *************** *** 195,199 **** ob_implicit_flush(1); echo "<br><pre>\n"; ! $err = $spi->createSpotImages(); ob_implicit_flush(0); echo "</pre><p><table $cellpad>\n"; --- 203,207 ---- ob_implicit_flush(1); echo "<br><pre>\n"; ! $err = $spi->createSpotImages($skiptiffs); ob_implicit_flush(0); echo "</pre><p><table $cellpad>\n"; *************** *** 224,227 **** --- 232,246 ---- <td><input type=text size=8 name=i_imgoffy value="<?= $raw->getSpotImageOffsetY() ?>"> units</td></tr> + <? + if($tifftype == 2) + { + ?> + <tr><th>Skip preview TIFFs</th> + <td><input type=text size=8 name=i_skiptiffs value="<?= + $skiptiffs ?>"> first parts of multi-image TIFF will be + skipped</td></tr> + <? + } + ?> <tr><td colspan=2><input type=submit name=i_useheader value="Get data from header"> Index: raw_table.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/raw_table.phtml,v retrieving revision 1.3 retrieving revision 1.4 diff -C2 -d -r1.3 -r1.4 *** raw_table.phtml 3 Feb 2003 08:55:47 -0000 1.3 --- raw_table.phtml 13 Feb 2003 22:29:38 -0000 1.4 *************** *** 183,187 **** { $cols[] = array("spots", false, array("Sp", $spots), ! 0, "renderSpot", 0, "w" => 1); } --- 183,187 ---- { $cols[] = array("spots", false, array("Sp", $spots), ! 0, "renderSpots", 0, "w" => 1); } *************** *** 207,214 **** function renderSpots(&$row) { ! global $cbRaw; $pos = $row["rawPosition"]; ! $s *= 1; echo "<td><img width=$s height=$s ". "src='raw_spot.phtml/spot_${cbRaw}_${pos}_$s.png'></td>\n"; --- 207,214 ---- function renderSpots(&$row) { ! global $cbRaw, $raw; $pos = $row["rawPosition"]; ! $s = $raw->getSpotImagePixels() * 1; echo "<td><img width=$s height=$s ". "src='raw_spot.phtml/spot_${cbRaw}_${pos}_$s.png'></td>\n"; Index: test.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/test.phtml,v retrieving revision 1.61 retrieving revision 1.62 diff -C2 -d -r1.61 -r1.62 *** test.phtml 13 Feb 2003 11:36:53 -0000 1.61 --- test.phtml 13 Feb 2003 22:29:38 -0000 1.62 *************** *** 25,28 **** --- 25,30 ---- //require_once("init.inc.php"); + echo ("-1" == -1)."\n\n"; + $arr = array(-1 => "a", 0 => "b", 1 => "c"); $arr["-1"] = "e"; |
From: <tr...@us...> - 2003-02-13 22:22:06
|
Update of /cvsroot/basedb/basedb In directory sc8-pr-cvs1:/tmp/cvs-serv501 Modified Files: README Log Message: updated LOCAL INFILE info (thanks, Philippe) Index: README =================================================================== RCS file: /cvsroot/basedb/basedb/README,v retrieving revision 1.23 retrieving revision 1.24 diff -C2 -d -r1.23 -r1.24 *** README 13 Feb 2003 12:26:44 -0000 1.23 --- README 13 Feb 2003 22:22:02 -0000 1.24 *************** *** 44,51 **** better performance. Be sure to enable the query cache, and maybe set query_cache_limit to a lower value than the default (10k should be enough). ! When you install MySQL, make sure that LOAD LOCAL DATA INFILE works. The ! binary distributions from mysql.com have this, but the packages included ! with some Linux distributions don't. If you compile MySQL yourself, you can ! configure with --enable-local-infile. As of BASE 1.2, PHP 4.3 is the ONLY supported version of PHP. Versions --- 44,58 ---- better performance. Be sure to enable the query cache, and maybe set query_cache_limit to a lower value than the default (10k should be enough). ! ! For better performance in some situations (result file upload, running ! plugins, etc.), BASE can use LOAD LOCAL DATA INFILE as an alternative to ! just doing plain INSERTS. If you want to use LOAD LOCAL DATA INFILE, you ! should configure MySQL with --enable-local-infile. The binary distributions ! from mysql.com have this, but the packages included with some Linux ! distributions don't. Also, PHP will need to be built against the MySQL ! libraries that come with MySQL, rather than against the ones that come with ! PHP. That is, PHP needs --with-mysql=... rather than just --with-mysql . ! Finally, for LOAD LOCAL to be used, there is an option in the configuration ! file for BASE (see further down in this README). As of BASE 1.2, PHP 4.3 is the ONLY supported version of PHP. Versions |
From: <tr...@us...> - 2003-02-13 12:34:42
|
Update of /cvsroot/basedb/basedb/include/web In directory sc8-pr-cvs1:/tmp/cvs-serv29737/include/web Modified Files: newinit.inc.php Log Message: added check for config Index: newinit.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/web/newinit.inc.php,v retrieving revision 1.4 retrieving revision 1.5 diff -C2 -d -r1.4 -r1.5 *** newinit.inc.php 30 Dec 2002 22:09:17 -0000 1.4 --- newinit.inc.php 13 Feb 2003 12:34:39 -0000 1.5 *************** *** 21,24 **** --- 21,28 ---- // Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. // + + if(!isset($config)) + die("Fatal error: newinit.inc.php included without config.inc.php!\n"); + require_once("db.inc.php"); require_once("user.inc.php"); |
From: <tr...@us...> - 2003-02-13 12:31:41
|
Update of /cvsroot/basedb/basedb/sql In directory sc8-pr-cvs1:/tmp/cvs-serv28572/sql Modified Files: Makefile.am Log Message: added missing file Index: Makefile.am =================================================================== RCS file: /cvsroot/basedb/basedb/sql/Makefile.am,v retrieving revision 1.1 retrieving revision 1.2 diff -C2 -d -r1.1 -r1.2 *** Makefile.am 12 Feb 2003 17:00:48 -0000 1.1 --- Makefile.am 13 Feb 2003 12:31:36 -0000 1.2 *************** *** 5,7 **** sqldir = $(prefix)/sql ! dist_sql_DATA = base_mysql.sql base_mysql_data.sql base_pgsql.sql --- 5,8 ---- sqldir = $(prefix)/sql ! dist_sql_DATA = base_mysql.sql base_mysql_data.sql base_pgsql.sql \ ! upgrade_rc1_to_rc2.sql |
From: <tr...@us...> - 2003-02-13 12:26:48
|
Update of /cvsroot/basedb/basedb In directory sc8-pr-cvs1:/tmp/cvs-serv26788 Modified Files: README Log Message: Added nore about ./configure not detecting libs Index: README =================================================================== RCS file: /cvsroot/basedb/basedb/README,v retrieving revision 1.22 retrieving revision 1.23 diff -C2 -d -r1.22 -r1.23 *** README 13 Feb 2003 12:22:47 -0000 1.22 --- README 13 Feb 2003 12:26:44 -0000 1.23 *************** *** 97,101 **** where the prefix is wherever you wish BASE to be installed. The default prefix is /usr/local/base. Note that BASE will install a number of files ! and directories in the prefix dir, so make sure it's a BASE-only directory. Next, compile the things that need to be compiled: --- 97,103 ---- where the prefix is wherever you wish BASE to be installed. The default prefix is /usr/local/base. Note that BASE will install a number of files ! and directories in the prefix dir, so make sure you put e.g. /foo/bar/base ! instead of /foo/bar, unless you really want lots of files in /foo/bar ! If configure tells you that you don't have gsl or somesuch, just ignore it. Next, compile the things that need to be compiled: |
From: <tr...@us...> - 2003-02-13 12:24:00
|
Update of /cvsroot/basedb/basedb/sql In directory sc8-pr-cvs1:/tmp/cvs-serv25703/sql Modified Files: base_mysql_data.sql base_pgsql.sql Log Message: Bumped schema version Index: base_mysql_data.sql =================================================================== RCS file: /cvsroot/basedb/basedb/sql/base_mysql_data.sql,v retrieving revision 1.2 retrieving revision 1.3 diff -C2 -d -r1.2 -r1.3 *** base_mysql_data.sql 2 Feb 2003 18:17:08 -0000 1.2 --- base_mysql_data.sql 13 Feb 2003 12:23:56 -0000 1.3 *************** *** 53,57 **** INSERT INTO SampleTissue (id, parent, name, descr, owner, addedDate, removed) VALUES (1,'','Homo sapiens','',1,'0000-00-00',''); ! INSERT INTO SchemaVersion VALUES ('1.2.0RC1','1.2.2', '2002-12-23 15:53:17'); INSERT INTO UserGroup (id, name, descr, owner, addedDate, removed, accessMask,isAccount) VALUES --- 53,57 ---- INSERT INTO SampleTissue (id, parent, name, descr, owner, addedDate, removed) VALUES (1,'','Homo sapiens','',1,'0000-00-00',''); ! INSERT INTO SchemaVersion VALUES ('1.2.0RC2','1.2.3', '2002-02-13 12:44:00'); INSERT INTO UserGroup (id, name, descr, owner, addedDate, removed, accessMask,isAccount) VALUES Index: base_pgsql.sql =================================================================== RCS file: /cvsroot/basedb/basedb/sql/base_pgsql.sql,v retrieving revision 1.2 retrieving revision 1.3 diff -C2 -d -r1.2 -r1.3 *** base_pgsql.sql 2 Feb 2003 18:17:29 -0000 1.2 --- base_pgsql.sql 13 Feb 2003 12:23:56 -0000 1.3 *************** *** 234,239 **** "bioAssaySet" int NOT NULL default '0', "extraDataColumn" int NOT NULL default '0', ! "position" smallint NOT NULL default '0' ! , CONSTRAINT BioAssaySetExtraColumn_pkey PRIMARY KEY ("bioAssaySet","extraDataColumn") ); --- 234,239 ---- "bioAssaySet" int NOT NULL default '0', "extraDataColumn" int NOT NULL default '0', ! "position" smallint NOT NULL ! , CONSTRAINT BioAssaySetExtraColumn_pkey PRIMARY KEY ("bioAssaySet","position") ); *************** *** 1324,1328 **** CREATE INDEX BioAssaySet_experiment_index ON BioAssaySet USING btree ("experiment"); ! CREATE UNIQUE INDEX BioAssaySetExtraColumn_setpos_index ON BioAssaySetExtraColumn USING btree ("bioAssaySet","position"); CREATE UNIQUE INDEX BioAssaySetSearch_ref_index ON BioAssaySetSearch USING btree ("bioAssaySet","userGroup","searchType"); --- 1324,1328 ---- CREATE INDEX BioAssaySet_experiment_index ON BioAssaySet USING btree ("experiment"); ! CREATE UNIQUE INDEX BioAssaySetExtraColumn_setcol_index ON BioAssaySetExtraColumn USING btree ("bioAssaySet","extraDataColumn"); CREATE UNIQUE INDEX BioAssaySetSearch_ref_index ON BioAssaySetSearch USING btree ("bioAssaySet","userGroup","searchType"); |
From: <tr...@us...> - 2003-02-13 12:23:59
|
Update of /cvsroot/basedb/basedb/bin In directory sc8-pr-cvs1:/tmp/cvs-serv25703/bin Modified Files: dbmigrate_107_to_12.php startBase.php Log Message: Bumped schema version Index: dbmigrate_107_to_12.php =================================================================== RCS file: /cvsroot/basedb/basedb/bin/dbmigrate_107_to_12.php,v retrieving revision 1.3 retrieving revision 1.4 diff -C2 -d -r1.3 -r1.4 *** dbmigrate_107_to_12.php 3 Feb 2003 17:39:29 -0000 1.3 --- dbmigrate_107_to_12.php 13 Feb 2003 12:23:56 -0000 1.4 *************** *** 157,161 **** // This is the first insert into to the new database, because we // use the SchemaVersion table to test if the database is empty. ! $query = "INSERT INTO SchemaVersion VALUES ('1.2.0RC1', '1.2.2', NOW())"; myquery($query, 1); --- 157,161 ---- // This is the first insert into to the new database, because we // use the SchemaVersion table to test if the database is empty. ! $query = "INSERT INTO SchemaVersion VALUES ('1.2.0RC2', '1.2.3', NOW())"; myquery($query, 1); Index: startBase.php =================================================================== RCS file: /cvsroot/basedb/basedb/bin/startBase.php,v retrieving revision 1.3 retrieving revision 1.4 diff -C2 -d -r1.3 -r1.4 *** startBase.php 10 Feb 2003 08:40:40 -0000 1.3 --- startBase.php 13 Feb 2003 12:23:56 -0000 1.4 *************** *** 129,136 **** global $BC; $sv = $BC->schemaVersion(); ! if($sv != "1.2.2") { fwrite(STDERR, "Error: The database schema version is $sv,\n". ! "but this version of BASE requires schema version 1.2.2\n"); return 0; } --- 129,137 ---- global $BC; $sv = $BC->schemaVersion(); ! if($sv != "1.2.3") { fwrite(STDERR, "Error: The database schema version is $sv,\n". ! "but this version of BASE requires schema version 1.2.3\n". ! "Use the migration scripts in bin to correct this.\n"); return 0; } |
From: <tr...@us...> - 2003-02-13 12:22:51
|
Update of /cvsroot/basedb/basedb In directory sc8-pr-cvs1:/tmp/cvs-serv25237 Modified Files: README Log Message: Updated ftpd stuff, migration stuff Index: README =================================================================== RCS file: /cvsroot/basedb/basedb/README,v retrieving revision 1.21 retrieving revision 1.22 diff -C2 -d -r1.21 -r1.22 *** README 12 Feb 2003 17:57:02 -0000 1.21 --- README 13 Feb 2003 12:22:47 -0000 1.22 *************** *** 265,283 **** Included with BASE is an FTP server which can be used to upload/download ! file to/from BASE. In the future it'll also handle downloads of other types. ! If you want to use it, here's how: When you compiled the things in ! exec/source, two programs called spawner and baseftpd were created and ! copied to exec/baseftpd. baseftpd needs to be started by inetd, but in the ! case that you don't have access to inetd.conf (my situation on the BASE ! development box), spawner can be used instead, e.g. ! nohup ./spawner 2121 ./baseftpd & ! to listen for connections on port 2121. Using inetd (the normal solution), [...72 lines suppressed...] *** 310,313 **** This will - if all goes well - copy data from the old databases to the new, and at the same time modify the data directory as needed. ! Start BASE using the script exec/restart.php --- 315,328 ---- This will - if all goes well - copy data from the old databases to the new, and at the same time modify the data directory as needed. ! Start BASE using the script bin/startBase.php as described above. ! ! If you have BASE 1.2.0RC1 installed, upgrading to RC2 will be relatively ! painless. You can use the old data directory without any changes, but the ! rest of the old installation needs to be replaced. There have been a few ! changes to the things required in config.inc.php, so you should copy the ! new example_config.inc.php and modify with things from your old config. ! Finally, there have been three changes to the database schema. Two of ! these can be considered bug fixes, and the third was just something I'd ! forgotten to add. The file sql/upgrade_rc1_to_rc2.sql contains the SQL ! statements that need to be run to get the schema up to date. |
From: <tr...@us...> - 2003-02-13 12:06:52
|
Update of /cvsroot/basedb/basedb/sql In directory sc8-pr-cvs1:/tmp/cvs-serv17804/sql Added Files: upgrade_rc1_to_rc2.sql Log Message: Untested --- NEW FILE: upgrade_rc1_to_rc2.sql --- DROP TABLE BioAssaySetExtraColumn; CREATE TABLE BioAssaySetExtraColumn ( bioAssaySet int(11) NOT NULL default '0', extraDataColumn int(11) NOT NULL default '0', position tinyint(4) NOT NULL auto_increment, PRIMARY KEY (bioAssaySet,position), UNIQUE KEY setcol (bioAssaySet,extraDataColumn) ) TYPE=MyISAM; ALTER TABLE UserAccount ADD defaultGid int(11) NOT NULL default '0', ADD defaultGroupAccess tinyint(1) NOT NULL default '0', ADD defaultWorldAccess tinyint(1) NOT NULL default '0'; ALTER TABLE UserGroup CHANGE name name varchar(30) default NULL; UPDATE SchemaVersion SET baseVersion = '1.2.0RC2', schemaVersion = '1.2.3', lastChanged = NOW(); |
From: <tr...@us...> - 2003-02-13 11:36:56
|
Update of /cvsroot/basedb/basedb/www In directory sc8-pr-cvs1:/tmp/cvs-serv1522/www Modified Files: raw_makeimages.phtml test.phtml Log Message: Updated image channel handling Index: raw_makeimages.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/raw_makeimages.phtml,v retrieving revision 1.2 retrieving revision 1.3 diff -C2 -d -r1.2 -r1.3 *** raw_makeimages.phtml 13 Dec 2002 07:24:29 -0000 1.2 --- raw_makeimages.phtml 13 Feb 2003 11:36:53 -0000 1.3 *************** *** 3,7 **** // // BioArray Software Environment (BASE) - homepage http://base.thep.lu.se/ ! // Copyright (C) 2002 Lao Saal, Carl Troein, Johan Vallon-Christersson // // This file is part of BASE. --- 3,7 ---- // // BioArray Software Environment (BASE) - homepage http://base.thep.lu.se/ ! // Copyright (C) 2002,2003 Lao Saal, Carl Troein, Johan Vallon-Christersson // // This file is part of BASE. *************** *** 182,187 **** <tr><td colspan=2>The 'use for JPEG' flag needs to be set for one TIFF image from channel 1 and one from channel 2, or one two-channel TIFF. ! <input type=submit name=i_autoimg ! value="Attempt automatic recognition"></td></tr> <? } --- 182,187 ---- <tr><td colspan=2>The 'use for JPEG' flag needs to be set for one TIFF image from channel 1 and one from channel 2, or one two-channel TIFF. ! <br><input type=submit name=i_autoimg ! value="Attempt to auto-select image(s)"></td></tr> <? } *************** *** 234,238 **** echo "</table><p>\n"; showDelPrep(); ! imageList($acq, $curUser, true); echo "</form>\n"; --- 234,238 ---- echo "</table><p>\n"; showDelPrep(); ! imageList($acq, $curUser, true, "in image set"); echo "</form>\n"; Index: test.phtml =================================================================== RCS file: /cvsroot/basedb/basedb/www/test.phtml,v retrieving revision 1.60 retrieving revision 1.61 diff -C2 -d -r1.60 -r1.61 *** test.phtml 30 Dec 2002 22:09:18 -0000 1.60 --- test.phtml 13 Feb 2003 11:36:53 -0000 1.61 *************** *** 23,30 **** header("content-type: text/plain"); ! require_once("init.inc.php"); ! print_r($_SERVER); exit; --- 23,36 ---- header("content-type: text/plain"); ! //require_once("init.inc.php"); ! $arr = array(-1 => "a", 0 => "b", 1 => "c"); ! $arr["-1"] = "e"; ! $arr["0"] = "f"; ! $arr["1"] = "g"; + print_r($arr); + echo "\n"; + var_dump($arr); exit; |
From: <tr...@us...> - 2003-02-13 11:36:55
|
Update of /cvsroot/basedb/basedb/include/web In directory sc8-pr-cvs1:/tmp/cvs-serv1522/include/web Modified Files: hyb_common.inc.php Log Message: Updated image channel handling Index: hyb_common.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/web/hyb_common.inc.php,v retrieving revision 1.10 retrieving revision 1.11 diff -C2 -d -r1.10 -r1.11 *** hyb_common.inc.php 3 Feb 2003 08:51:13 -0000 1.10 --- hyb_common.inc.php 13 Feb 2003 11:36:52 -0000 1.11 *************** *** 153,156 **** --- 153,157 ---- $l =& $lab[$acqid]; + $ch = (int)$ch; $clink = isset($chnames[$ch]) ? html($chnames[$ch]) : "unknown"; if(isset($l[$ch])) *************** *** 161,165 **** // Image list for an imageacquisition. Makes its own table, wants to be // in a form called ff. ! function imageList(&$acq, &$user, $edit) { global $tdbg; --- 162,166 ---- // Image list for an imageacquisition. Makes its own table, wants to be // in a form called ff. ! function imageList(&$acq, &$user, $edit, $titleextra = "") { global $tdbg; *************** *** 175,180 **** $sortorder = array(1, 1, 1, -1, 1, 1, -1, 0); $defsort = 0; makeSearchHeader($search, $headerfields, $sortorder, $defsort, ! "", "document.ff.submit();", "Images ".webHelp(92, 1), 2); if($acq->mayEdit($user)) --- 176,183 ---- $sortorder = array(1, 1, 1, -1, 1, 1, -1, 0); $defsort = 0; + if($titleextra != "") + $titleextra .= " "; makeSearchHeader($search, $headerfields, $sortorder, $defsort, ! "", "document.ff.submit();", "Images $titleextra".webHelp(92, 1), 2); if($acq->mayEdit($user)) |
From: <tr...@us...> - 2003-02-13 11:36:55
|
Update of /cvsroot/basedb/basedb/include/classes In directory sc8-pr-cvs1:/tmp/cvs-serv1522/include/classes Modified Files: acquisition.inc.php image.inc.php spotimage.inc.php Log Message: Updated image channel handling Index: acquisition.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/acquisition.inc.php,v retrieving revision 1.13 retrieving revision 1.14 diff -C2 -d -r1.13 -r1.14 *** acquisition.inc.php 13 Feb 2003 08:47:45 -0000 1.13 --- acquisition.inc.php 13 Feb 2003 11:36:52 -0000 1.14 *************** *** 191,195 **** while($row =& db_fetch_row($res)) $arr[] = $row[0]; ! if(count($arr) == 1 && $arr[0] == 3) return true; if(count($arr) == 2 && $arr[0] == 1 && $arr[1] == 2) --- 191,195 ---- while($row =& db_fetch_row($res)) $arr[] = $row[0]; ! if(count($arr) == 1 && $arr[0] == IMAGE_CHANNEL_BOTH) return true; if(count($arr) == 2 && $arr[0] == 1 && $arr[1] == 2) *************** *** 204,213 **** $query = "SELECT i.channels, i.id FROM Image i ". "WHERE i.`imageAcquisition` = $this->id ". ! "AND i.channels IN (1,2,3) ". Item::whereRemovedAnd("i", 0)." ". "ORDER BY channels"; $res = query($query); $arr = array(); ! $imgs = array(1 => 0, 2 => 0, 3 => 0); while($row =& db_fetch_row($res)) { --- 204,213 ---- $query = "SELECT i.channels, i.id FROM Image i ". "WHERE i.`imageAcquisition` = $this->id ". ! "AND i.channels IN (1, 2, ".IMAGE_CHANNEL_BOTH.") ". Item::whereRemovedAnd("i", 0)." ". "ORDER BY channels"; $res = query($query); $arr = array(); ! $imgs = array(1 => 0, 2 => 0, IMAGE_CHANNEL_BOTH => 0); while($row =& db_fetch_row($res)) { *************** *** 218,227 **** if($imgs[1] >= 1 && $imgs[2] >= 1) $found++; ! if($imgs[3] >= 1) $found++; if(!$found) return 1; ! if($found > 1 || $imgs[1] > 1 || $imgs[2] > 1 || $imgs[3] > 1) return 2; for($i = 0; $i < count($arr); $i++) --- 218,230 ---- if($imgs[1] >= 1 && $imgs[2] >= 1) $found++; ! if($imgs[IMAGE_CHANNEL_BOTH] >= 1) $found++; if(!$found) return 1; ! if($found > 1 || $imgs[1] > 1 || $imgs[2] > 1 || ! $imgs[IMAGE_CHANNEL_BOTH] > 1) ! { return 2; + } for($i = 0; $i < count($arr); $i++) Index: image.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/image.inc.php,v retrieving revision 1.14 retrieving revision 1.15 diff -C2 -d -r1.14 -r1.15 *** image.inc.php 3 Feb 2003 20:13:18 -0000 1.14 --- image.inc.php 13 Feb 2003 11:36:52 -0000 1.15 *************** *** 26,29 **** --- 26,35 ---- define("CLEN_IMAGE_NAME", 255); + define("IMAGE_CHANNEL_NONE", 0); + define("IMAGE_CHANNEL_ALL", -1); + define("IMAGE_CHANNEL_OTHER", -2); + define("IMAGE_CHANNEL_BOTH", -3); + define("IMAGE_CHANNEL_MAX", 8); + class Image extends Item { *************** *** 91,95 **** function setChannels($val) { ! $this->channels = (int)$val; } function setFileSize($val) --- 97,102 ---- function setChannels($val) { ! $this->channels = max(IMAGE_CHANNEL_BOTH, ! min(IMAGE_CHANNEL_MAX, (int)$val)); } function setFileSize($val) *************** *** 187,191 **** $arr = array(); while($row =& db_fetch_row($res)) ! $arr[$row[0]] = $row[1]; return $arr; } --- 194,198 ---- $arr = array(); while($row =& db_fetch_row($res)) ! $arr[(int)$row[0]] = $row[1]; return $arr; } *************** *** 212,219 **** function getChannelNames() { ! $names = array(-1 => "All", -3 => "Both", 0 => "None"); ! for($i = 1; $i < 9; $i++) $names[$i] = "Ch $i"; ! $names[-2] = "Other"; return $names; } --- 219,228 ---- function getChannelNames() { ! $names = array(IMAGE_CHANNEL_ALL => "All", ! IMAGE_CHANNEL_BOTH => "Ch1 and 2", ! IMAGE_CHANNEL_NONE => "None"); ! for($i = 1; $i <= IMAGE_CHANNEL_MAX; $i++) $names[$i] = "Ch $i"; ! $names[IMAGE_CHANNEL_OTHER] = "Other"; return $names; } Index: spotimage.inc.php =================================================================== RCS file: /cvsroot/basedb/basedb/include/classes/spotimage.inc.php,v retrieving revision 1.9 retrieving revision 1.10 diff -C2 -d -r1.9 -r1.10 *** spotimage.inc.php 3 Feb 2003 20:13:19 -0000 1.9 --- spotimage.inc.php 13 Feb 2003 11:36:52 -0000 1.10 *************** *** 98,102 **** // $imgs is an array with either two images (keys 1 and 2) or one image ! // (key -3). function runSpotImageChopper($dir, $imgs) { --- 98,102 ---- // $imgs is an array with either two images (keys 1 and 2) or one image ! // (key IMAGE_CHANNEL_BOTH). function runSpotImageChopper($dir, $imgs) { *************** *** 135,139 **** { echo "Splitting two-channel TIFF image\n"; ! $imgBoth = $imgs[-3]; $fileBoth = escapeshellarg( Image::getRepositoryFilenameById($imgBoth)); --- 135,139 ---- { echo "Splitting two-channel TIFF image\n"; ! $imgBoth = $imgs[IMAGE_CHANNEL_BOTH]; $fileBoth = escapeshellarg( Image::getRepositoryFilenameById($imgBoth)); *************** *** 184,188 **** return "Spot images already exist or are being processed"; $imgs = Image::getBriefForJpeg($raw->getImageAcquisition()); ! if(count($imgs) == 1 && isset($imgs[-3])) ; else if(count($imgs) == 2 && isset($imgs[1]) && isset($imgs[2])) --- 184,188 ---- return "Spot images already exist or are being processed"; $imgs = Image::getBriefForJpeg($raw->getImageAcquisition()); ! if(count($imgs) == 1 && isset($imgs[IMAGE_CHANNEL_BOTH])) ; else if(count($imgs) == 2 && isset($imgs[1]) && isset($imgs[2])) *************** *** 196,200 **** { $BC->endTransaction(); ! return "Unable to lock data set for spot image processing"; } $dir = $raw->getSpotImageDirectory(true); --- 196,200 ---- { $BC->endTransaction(); ! return "Unable to lock raw data set for spot image processing"; } $dir = $raw->getSpotImageDirectory(true); |
From: <tr...@us...> - 2003-02-13 10:38:07
|
Update of /cvsroot/basedb/basedb/include/local_distr In directory sc8-pr-cvs1:/tmp/cvs-serv26240/include/local_distr Added Files: .cvsignore Log Message: Ignoring Makefile.in but not Makefile.am --- NEW FILE: .cvsignore --- Makefile.in Makefile |
From: <tr...@us...> - 2003-02-13 10:38:07
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Update of /cvsroot/basedb/basedb/include In directory sc8-pr-cvs1:/tmp/cvs-serv26240/include Added Files: .cvsignore Log Message: Ignoring Makefile.in but not Makefile.am --- NEW FILE: .cvsignore --- Makefile.in Makefile |
From: <tr...@us...> - 2003-02-13 10:38:06
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Update of /cvsroot/basedb/basedb/include/common In directory sc8-pr-cvs1:/tmp/cvs-serv26240/include/common Added Files: .cvsignore Log Message: Ignoring Makefile.in but not Makefile.am --- NEW FILE: .cvsignore --- Makefile.in Makefile |
From: <tr...@us...> - 2003-02-13 10:38:06
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Update of /cvsroot/basedb/basedb/include/drivers In directory sc8-pr-cvs1:/tmp/cvs-serv26240/include/drivers Added Files: .cvsignore Log Message: Ignoring Makefile.in but not Makefile.am --- NEW FILE: .cvsignore --- Makefile.in Makefile |
From: <tr...@us...> - 2003-02-13 10:37:19
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Update of /cvsroot/basedb/basedb/include/web In directory sc8-pr-cvs1:/tmp/cvs-serv26240/include/web Added Files: .cvsignore Log Message: Ignoring Makefile.in but not Makefile.am --- NEW FILE: .cvsignore --- Makefile.in Makefile |
From: <tr...@us...> - 2003-02-13 10:37:19
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Update of /cvsroot/basedb/basedb/misc In directory sc8-pr-cvs1:/tmp/cvs-serv26240/misc Added Files: .cvsignore Log Message: Ignoring Makefile.in but not Makefile.am --- NEW FILE: .cvsignore --- Makefile.in Makefile |
From: <tr...@us...> - 2003-02-13 10:36:35
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Update of /cvsroot/basedb/basedb/plugins In directory sc8-pr-cvs1:/tmp/cvs-serv26240/plugins Modified Files: .cvsignore Log Message: Ignoring Makefile.in but not Makefile.am Index: .cvsignore =================================================================== RCS file: /cvsroot/basedb/basedb/plugins/.cvsignore,v retrieving revision 1.1 retrieving revision 1.2 diff -C2 -d -r1.1 -r1.2 *** .cvsignore 1 Feb 2003 12:52:50 -0000 1.1 --- .cvsignore 13 Feb 2003 10:16:36 -0000 1.2 *************** *** 1 **** ! bin --- 1,2 ---- ! Makefile.in ! Makefile |