read library file for construction the 2bwt of reads

[Binghang Liu]

As mentioned in reame file, the read library file is the same to that for SOAPdenovo.
Here is an example( lines started with # will be ommitted):

#maximal read length

max_rd_len=100
[LIB]
#average insert size
avg_ins=300

#a pair of fastq file, read 1 file should always be followed by read 2 file
q1=/path/LIBNAMEA/fastq1_read_1.fq
q2=/path/LIBNAMEA/fastq1_read_2.fq

#another pair of fastq file, read 1 file should always be followed by read 2 file
q1=/path/LIBNAMEA/fastq2_read_1.fq
q2=/path/LIBNAMEA/fastq2_read_2.fq
#a pair of fasta file, read 1 file should always be followed by read 2 file
f1=/path/LIBNAMEA/fasta1_read_1.fa
f2=/path/LIBNAMEA/fasta1_read_2.fa
#another pair of fasta file, read 1 file should always be followed by read 2 file
f1=/path/LIBNAMEA/fasta2_read_1.fa
f2=/path/LIBNAMEA/fasta2_read_2.fa

#a new parameter to set the threshold of base quality.
qual_cutoff=74

[LIB]
...