https://sourceforge.net/p/bamformatics/wiki/GUI/Recent changes to GUIenWed, 06 Mar 2013 21:40:30 -0000https://sourceforge.net/p/bamformatics/wiki/GUI/<div class="markdown_content"><pre>--- v1 +++ v2 @@ -1 +1,29 @@ -##Bamformatics GUI## +##GUI## + +**Note:** The GUI is an experimental component of the project and some quirky behaviour is to be expected. +<br /> + +The Bamformatics graphical interface can be launched via the command + + java -jar Bamformatics.jar gui + +At first-time launch, the program prompts to select/create a home directory where various settings and options can be saved. + +<br /> +####File-manager#### + +The main GUI window is organized as a file-manager. + +On the left, there are two panels that display contents of select directories. These panels are initially empty, but can be populated using the File/Import menu. + +An imported directory should appear in both of the left-hand panels. Expanding or viewing this directory, however, has different effects: data files are displayed in the top panel and executable/script/program files in the bottom panel. Thus, the panels separate files into those that hold data and those that specify actions that can be applied on data. + +<br /> +####Viewer#### + +On the right of the main GUI window, there is an area where miscellaneous objects can be viewed. + +To view the contents of a text file, right-click on the file in one of the panels on the left-hand-side and select *View* from the popup menu. This creates a tab on the right-hand side. A navigation bar helps to separate header lines from remaining data. + + +<br /> </pre> </div>TomaszWed, 06 Mar 2013 21:40:30 -0000https://sourceforge.netfe3ca4fa01e0e54ba6bc5c27c60f8d51e58bb81fhttps://sourceforge.net/p/bamformatics/wiki/GUI/<div class="markdown_content"><h2 id="bamformatics-gui">Bamformatics GUI</h2></div>TomaszSun, 03 Mar 2013 22:07:51 -0000https://sourceforge.net202f997707f0beea6e63a4d8a3458c3d8840447a