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From: Geoffrey Hutchison <geoff@ge...> - 2009-11-26 21:15:49
|
> (1) When I save a built peptide as PDB, the atoms don't have the expected names i.e. CA, CB, HG12, ND2 ... Sorry, that's a new bug, caused by one of my bug fixes. I'll work something out there... > (2) When building peptides, there are a number of things it would be nice to have: > be able to specify Acetyl and NMe caps Yes, point taken. They're a little harder to do than the current caps, but I'll work on that for 1.2. > be able to specify 3-10 and pi helix in addition to the existing conformation types (though can in effect already do so by specifying suitable default phi and psi). Since I'm not a biochemist, could you give me typical phi/psi values for 3-10 and pi helices? Thanks! -Geoff |