Hello! Thanks for a great soft, Avogadro!
I need to write a python code to do a rotation of a part of a molecule around a chosen bond. I need a code to change this torsional angle in small increments and save cartesian coordinates for each alteration of the angle. Rotate, save, increment the angle, rotate, save, etc... Can anyone please tell me, how can I use Avogadro in a command line to choose a bond, to rotate around it and to save resulting cartesian coordinates. Any manual, guide?