[Avalontoolkit-discuss] Incorrect number of Hs on P when reading aromatic SMILES

[Noel O'B. <bao...@gm...>]

Hi there,

I've been testing a large number of SMILES readers with a view to improving
quality and finding corner cases that should be resolved.

When reading the SMILES string c1cccc2c1p(c3c2cccc3)C, the Avalon toolkit
adds a hydrogen to the phosphorus, which I believe is an error (if it had a
hydrogen it should be written [pH]). If replaced with an 'n', no H is added.

Regards,
- Noel