#13 vcfPrinter output VCF file has incorrect sample format in some of the sample-sites when in indel mode

2.0
closed
bug (5)
2013-02-06
2013-01-17
Atlas2Team
No

This bug only affects vcfPrinter when run with the --indel option. All sample-sites with the NonVar filter have an extra blank column at the end of the entry. For example:
0/0:0:8:8:.:NonVar:.
which should instead be:
0/0:0:8:8:.:NonVar

Discussion

  • Danny Challis

    Danny Challis - 2013-01-28
    • status: open --> accepted
     
  • Danny Challis

    Danny Challis - 2013-02-06
    • assigned_to: Danny Challis
     
  • Danny Challis

    Danny Challis - 2013-02-06

    This bug has been fixed as of revision 172.

     
  • Danny Challis

    Danny Challis - 2013-02-06
    • status: accepted --> closed
     


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