arrayOligoSelector 3.8.4 problem
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Fails during Pick70_script1_contig on mitochondrial DNA sequence
of S. cerevisiae (divided into 2kb sequences). Error msg received:
File "code/Pick70_genome_itself.py", line 422, in ?
parsing_each_query(content,fout)
File "code/Pick70_genome_itself.py", line 246, in
parsing_each_query
query_len=parse_dic[query][0]
KeyError: 0
Program terminated
But when I removed the last ~2kb sequences from the sequence,
program was able to run.
I've attached the problematic sequence along with the mask file.
email: katy@genome.stanford.edu
sequence file