DP

Installation

ARDEN is a collection of python scripts and therefore needs no installation.
It was built and tested on a Linux platform. However, for convenient access it
is recommended to do the following adjustments to your environment variables / .bashrc:

export PATH = $PATH:/path/to/ARDEN

Dependencies

ARDEN is implemented building upon various available software packages for python. It was designed and tested under Linux with the following packages and versions.

• Python 2.7, http://www.python.org/
• NumPy 1.6.1, http://numpy.scipy.org/
• SciPy 0.10.0, http://www.scipy.org/
• HTSeq 0.5.3p9, https://pypi.python.org/pypi/HTSeq
• matplotlib 1.1.0, http://matplotlib.org/