APSampler Activity

APSampler is a tool that finds multifactorial association patterns

Brought to you by: dimalvov, favorov

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Activity for APSampler

• 2 years ago

  Alexander Favorov committed [c0c133] on Code

  do not print priors in report

• 2 years ago

  Alexander Favorov committed [20666a] on Code

  Now, we show the dictionary content in report onl;y if DEBUG_PRINT>1

• 2 years ago

  dimalvovs committed [ab4ac4] on Code

  return 1k steps back

• 2 years ago

  dimalvovs committed [4f62a4] on Code

  add pattern_validation

• 2 years ago

  Alexander Favorov committed [759dc2] on Code

  Version 3.72

• 2 years ago

  Alexander Favorov committed [1017b2] on Code

  Calculates its own runtime

• 2 years ago

  Alexander Favorov committed [6d31ea] on Code

  now, we exactly tell the max_warm_up==0 case from others and do not get additional point in statistics

• 2 years ago

  Alexander Favorov modified a wiki page

  Readme

• 2 years ago

  Alexander Favorov committed [41e6b7] on Code

  max_warm_up_steps_number started to work

• 2 years ago

  Alexander Favorov committed [d95ff0] on Code

  described

• 2 years ago

  Alexander Favorov committed [848045] on Code

  switched to unix endline format

• 2 years ago

  Alexander Favorov committed [5d4078] on Code

  test for no-wait statistics gather inited

• 2 years ago

  Alexander Favorov committed [000197] on Code

  Added accept-diring-gather to statistics

• 2 years ago

  Alexander Favorov committed [5a4415] on Code

  switched to unix endline format

• 2 years ago

  Alexander Favorov committed [bdfb66] on Code

  added new lines to statisticsfile: attempts, rejects and attemts-while-gather, changes from: to gather-from:

• 2 years ago

  Alexander Favorov committed [06c7f4] on Code

  new standard for keeping test folder

• 2 years ago

  Alexander Favorov committed [496754] on Code

  new standard for keeping test folder

• 2 years ago

  Alexander Favorov committed [d82d30] on Code

  new standard for keeping test folder

• 2 years ago

  Alexander Favorov committed [95b982] on Code

  renaming test folder to test_time after tests

• 2 years ago

  Alexander Favorov committed [8c01aa] on Code

  it runs

• 2 years ago

  Alexander Favorov committed [8864bc] on Code

  trying first point

• 2 years ago

  Alexander Favorov committed [b5e3a9] on Code

  test fot first point bug; new test style

• 2 years ago

  Alexander Favorov committed [55fe8b] on Code

  Merge branch 'tests' into devel

• 2 years ago

  Alexander Favorov committed [72ff74] on Code

  chmod to 755

• 2 years ago

  Alexander Favorov committed [d65223] on Code

  used ok and is_deeply

• 2 years ago

  dimalvovs committed [664f87] on Code

  rename tests for auto-prove

• 2 years ago

  dimalvovs committed [f6a9dd] on Code

  debug tests

• 2 years ago

  dimalvovs committed [4ca298] on Code

  add sampler run test

• 2 years ago

  dimalvovs committed [763378] on Code

  init

• 2 years ago

  Alexander Favorov committed [13e643] on Code

  cleaned the folder a bit

• 3 years ago

  Alexander Favorov committed [9d4381] on Code

  change bash shebang #/usr/bin/env perl bash

• 3 years ago

  Alexander Favorov committed [a4dce8] on Code

  Changed the word pole to field in Fisher test-related output

• 3 years ago

  alena committed [41dca8] on Code

  start to gather from (the uninformative pattern reliability*41/42)+1/42, is is less than 1 and a bit higher than the uninformative pattern reliability

• 3 years ago

  alena committed [45b7e5] on Code

  reasonable defaults for max_mute_steps_number

• 3 years ago

  alena committed [91fc29] on Code

  started to assign a reasonable value to max_mute_steps_number

• 3 years ago

  alena committed [a942ff] on Code

  returned to first_poit_how notation in config

• 3 years ago

  alena committed [8facca] on Code

  Merge branch 'devel' of ssh://git.code.sf.net/p/apsampler/code into devel

• 3 years ago

  alena committed [9239cb] on Code

  Comment about priors fixed

• 3 years ago

  alena committed [092666] on Code

  Null prior for gwas <- 0.999

• 3 years ago

  alena committed [ac2890] on Code

  this->noninformative_pattern_null_hypothesis_prior=null_hypothesis_prior instead of 1(it was a error)

• 3 years ago

  alena committed [14a537] on Code

  Formatting report output of the config

• 3 years ago

  alena committed [39af81] on Code

  Fixed the report about monoallelic test, it was reported as unneded in any case

• 3 years ago

  alena committed [403ce8] on Code

  we found where the memory was broken: additiona nonexisting pattern was inited in selection

• 3 years ago

  alena committed [df162f] on Code

  Strted to fix strange errors in combinations

• 3 years ago

  alena committed [e05fe7] on Code

  fixing obvious errors in combinations

• 3 years ago

  alena committed [d218e7] on Code

  allocation of selection simplified; combinations fixed

• 3 years ago

  alena committed [545c3f] on Code

  trying fix the allocation bug in selections, some more tyrpos

• 3 years ago

  alena committed [632caf] on Code

  going on looking for

• 3 years ago

  alena committed [ba856e] on Code

  Now, we have two differen segfaults

• 3 years ago

  alena committed [77d98c] on Code

  combinations bug fixed, there was wrong code in two lines

• 3 years ago

  alena committed [8d4ee6] on Code

  allocate associate_allels_selection in combinations

• 3 years ago

  alena committed [aca600] on Code

  debug core dump

• 3 years ago

  Alexander Favorov committed [598c7f] on Code

  returned to first_poit_how notation in config

• 3 years ago

  Alexander Favorov committed [301a09] on Code

  start to gather from (the uninformative pattern reliability*41/42)+1/42, is is less than 1 and a bit higher than the uninformative pattern reliability

• 3 years ago

  Alexander Favorov committed [b74780] on Code

  reasonable defaults for max_mute_steps_number

• 3 years ago

  Alexander Favorov committed [c60b62] on Code

  started to assign a reasonable value to max_mute_steps_number

• 3 years ago

  Alexander Favorov committed [dc06fa] on Code

  Null prior for gwas <- 0.999

• 3 years ago

  Alexander Favorov committed [0bfb6c] on Code

  Comment about priors fixed

• 3 years ago

  Alexander Favorov committed [be2c7d] on Code

  this->noninformative_pattern_null_hypothesis_prior=null_hypothesis_prior instead of 1(it was a error)

• 3 years ago

  Alexander Favorov committed [566699] on Code

  Formatting report output of the config

• 3 years ago

  Alexander Favorov committed [15db67] on Code

  Fixed the report about monoallelic test, it was reported as unneded in any case

• 3 years ago

  Alexander Favorov committed [8af13e] on Code

  we found where the memory was broken: additiona nonexisting pattern was inited in selection

• 3 years ago

  Alexander Favorov committed [2b8c6e] on Code

  combinations bug fixed, there was wrong code in two lines

• 3 years ago

  Alexander Favorov committed [735dea] on Code

  fixing obvious errors in combinations

• 3 years ago

  Alexander Favorov committed [866d4c] on Code

  Strted to fix strange errors in combinations

• 3 years ago

  Alexander Favorov committed [5c8747] on Code

  Now, we have two differen segfaults

• 3 years ago

  Alexander Favorov committed [3f205c] on Code

  allocation of selection simplified; combinations fixed

• 3 years ago

  Alexander Favorov committed [680a10] on Code

  trying fix the allocation bug in selections, some more tyrpos

• 3 years ago

  Alexander Favorov committed [b75916] on Code

  going on looking for

• 3 years ago

  Alexander Favorov committed [13344f] on Code

  allocete associate_allels_selection in combinations

• 3 years ago

  Alexander Favorov committed [6a4f03] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [1a022f] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [c7a302] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [c804c0] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [a84088] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [57a8ed] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [2e5e3a] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [f6127c] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [007e35] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [418f29] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [caff6f] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [661b06] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [3916e8] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [3e373e] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [3ccda6] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [bbfb55] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [5f2e8c] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [6c346b] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [61201c] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [40d85b] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [f0268e] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [56bd8a] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [24c6e2] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [172c68] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [2f57f3] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [e6f8b9] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [05070c] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [f124f9] on Code

  trying to find core dump line

• 3 years ago

  Alexander Favorov committed [3eff5f] on Code

  next core dump fix attempt

• 3 years ago

  Alexander Favorov committed [118252] on Code

  core dump fix attempt

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