Menu

loadbioSQL

MV2012 Sarah Bourlat

loadbioSQL.py

(loading data to BioSQL database):

The trimmed sequence data, the cluster information, the parsed blast results information and the evalue information and were uploaded to the BioSQL database, bioseqdb, using a series of related python scripts, which can be accessed through these links:

loadbioSQL_biosequence.py (sourceforge.net)

clusters_SQL.py (sourceforge.net)

blastresults_SQL.py (sourceforge.net)

blastevalue_SQL.py (sourceforge.net)


Related

Wiki: Taxonomy assignment

MongoDB Logo MongoDB