Hi Raluca,

As this question is VMD-related, you'll have higher chances of getting the answer you need if you refer your question to the VMD mailing list. Keep this suggestion in mind for the future.

You can easily change these parameters if you go select your individual PB calculation in the APBS tool window, then click on 'Edit'. You should find another button called 'Edit' just right in front of the 'Mobile ions' option. This will allow you to change both values of ion concentration and radius.


On Tue, Sep 1, 2009 at 3:02 PM, Raluca Mihaela ANDREI <r.andrei@sns.it> wrote:
when I use APBS as a plug-in for VMD, I noticed that Mobile
ion concentration and mobile ion species radius is already
set. How can I set these 2 parameters if I use APBS from the
windows command line. I use APBS 1.1.0.
Thank you,

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