The remark lines are supposed to be numbered. It’s trying to parse the line number and failing. As it is just a remark the program will complain and keep going.

 

Kyle

 

From: Mohammad Jomah Ibraheem Ali Abu Saude (mbusaude) [mailto:mbusaude@memphis.edu]
Sent: September 21, 2012 07:35
To: Baker, Nathan
Cc: apbs-users@lists.sourceforge.net
Subject: Re: [apbs-users] I got error when I converted ssDna to pqr

 

I am attaching the PDB file 

 

Thank you 

 


From: Baker, Nathan [Nathan.Baker@pnnl.gov]
Sent: Friday, September 21, 2012 9:00 AM
To: Abusaud; apbs-users@googlegroups.com
Cc: (apbs-users@lists.sourceforge.net)
Subject: Re: [apbs-users] I got error when I converted ssDna to pqr

Can you please send us the PDB file you’re using?

 

Thanks,

 

__________________________________________________
Nathan Baker
Pacific Northwest National Laboratory
Tel:  +1-509-375-3997
http://nabaker.me

 

From: Abusaud [mailto:abusaude@gmail.com]
Sent: Thursday, September 20, 2012 11:11 AM
To: apbs-users@googlegroups.com
Subject: [apbs-users] I got error when I converted ssDna to pqr

 

Dear all,
 
I convert ssDNA (AAA) to pqr and I got the following error.
What does this error mean?
 
Error parsing line: invalid literal for int() with base 10: 'ori'
<REMARK original generated coordinate pdb file>