Ran.

Biochemistry. 1991 Oct 8;30(40):9686-97

Science. 1991 Apr 5;252(5002):106-9.

Assa Sittner wrote:

Hi there, as far as i know it (and correct me if i'm wrong) when calculating solvation energy i need to take into account two main factors: 1. electrostatic energy (from PB). 2. surface area term. how exactly do i calculate factor no. 2 using the APBS package? i can calculate surface area and weighted surface area using acc, but i don't know exactly what is this weighted surface area, and how it's calculated (refs are welcome). thanks, t. Assa Sittner Ribosomal crystallography group Dept. of structural biology. Weizmann inst. of science Israel. _______________________________________________ apbs-users mailing list apbs-users@cholla.wustl.edu http://cholla.wustl.edu/mailman/listinfo/apbs-users +++++++++++++++++++++++++++++++++++++++++++ This Mail Was Scanned By Mail-seCure System at the Tel-Aviv University CC.

-- ------------------------------------------------------ Ran Friedman Laser Laboratory for Fast Reactions in Biology Department of Biochemistry Faculty of Life Sciences Tel-Aviv University Tel. +972-3-6409824 Fax. +972-3-6409875 ------------------------------------------------------