Unfortunately, APBS does not currently support this feature. The maps you are attempting to write with the “write” command are volumetric representations of 3D functions that describe accessibility to solvent, etc.
Can you say a bit more about why you want this feature? We should be able to add it at some point.
Pacific Northwest National Laboratory
From: firstname.lastname@example.org [mailto:email@example.com]
Sent: Sunday, October 09, 2011 6:05 AM
Subject: [apbs-users] Solvent accessible surface area
Is there a way to get the water accessible surface area of each atom in a text format?
I tried :
write sol flat FileName
I got only 0 or 1, nothing in the range.
the dx file was also 0 or 1.
Is there an example for how using this write option?