I would recommend writing a Bash or Python script for this purpose.
Bash is particularly good for this type of thing and very easy to
construct. There are several excellent Bash tutorials online.
Chief Scientist for Signature Science
Pacific Northwest National Laboratory
From: Yonggang Han
Sent: Monday, July 26, 2010 11:49 PM
Subject: [Apbs-users] how to do batch processing with APBS on ubuntu
I have thousands of pqr files
to calculate the energe with APBS on Ubuntu. I hope this is can be done by
the Shell Scripts. how to do batch processing with APBS on ubuntu
Thank you very much! Any suggestion will be highly