> the script randomly stops without any error mesage after several
> at first i think it is lack of memory, so i move the job to run at
> node(64bit) with 16G memory and 4 cpu, every time i just submit
> one job at
> one node, the output of job show it costs memory about 2G, even
> so, the
> script stops too,
How did you compile your 64 bit binary? Did you use the MALOC BLAS
or some external (perhaps vendor-supplied) BLAS? The MALOC BLAS is
currently broken for many 64 bit machines.
> another little problem is every time i execute APBS *.in, the *.out
> always appear "asc_getToken: Error occurred (bailing out).
> Vio_scanf: Format problem with input.
> asc_getToken: Error occurred (bailing out).
> Vio_scanf: Format problem with input."
As has been mentioned before (see http://www.google.com/search?
client=safari&rls=en&q=asc_getToken&ie=UTF-8&oe=UTF-8 or http://
thread_id=9503730&forum_id=46597), this isn't really an error.
> i have test *.out with APBS's example output file, the results are
> the same,
> seems above error message doesn't affect the final result.
> i paste the script, the input, the output here!
> hope your reply!
Assistant Professor, Dept. of Biochemistry and Molecular Biophysics
Center for Computational Biology, Washington University in St. Louis
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