APAtrap Discussion

Identification of APA sites from RNA-seq data

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General Discussion

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Topic	Posts	Views	Last Post
Processing very large number of samples By Hugo Tavares on Tue May 30, 2023 05:46 PM	2	209	By Congting Ye on Fri Jun 16, 2023 03:26 AM
Modification of non-creatable array value attempted By Didelon on Tue Apr 18, 2023 11:36 AM	2	434	By Congting Ye on Thu Apr 20, 2023 04:28 AM
deAPA Error in Strsplit By Andrew Ring on Mon Jun 14, 2021 09:10 PM	2	254	By Congting Ye on Tue Jun 29, 2021 03:24 AM
Treatment of biological duplication By Shan Yu on Mon Apr 05, 2021 05:54 AM	1	213	By Shan Yu on Mon Apr 05, 2021 05:54 AM
Can not generate .utr.bed file using identifyDistal3UTR and predictAPA By Yao-Chung Chen on Sat Jan 04, 2020 09:36 AM	5	507	By Thomas Bradley on Fri Mar 19, 2021 04:23 PM
License By Thomas Bradley on Fri Sep 11, 2020 02:18 PM	3	142	By Thomas Bradley on Thu Mar 18, 2021 09:24 PM
rescan the region. By Guoxin Cai on Wed Dec 23, 2020 02:44 PM	2	172	By Congting Ye on Thu Dec 31, 2020 03:26 AM
Error: (-u) 3'UTR annotation file does not exist! at script/predictAP... By Yue Li on Mon May 18, 2020 06:19 PM	3	232	By Congting Ye on Mon May 25, 2020 12:40 AM
identifyDistal3UTR gives a blank output file? By Peter Combs on Mon Apr 08, 2019 10:02 PM	3	526	By Peter Combs on Wed Apr 10, 2019 05:30 PM
predictAPA: input and runtime By Nik dAK on Wed Dec 12, 2018 04:18 PM	2	495	By Congting Ye on Wed Jan 09, 2019 12:54 PM
Issue processing transcripts at chromosome/scaffold terminus By Thomas Bradley on Mon Oct 29, 2018 09:07 PM	5	383	By Congting Ye on Tue Nov 27, 2018 06:43 AM
Clarification of terms used in the documentation By Thomas Bradley on Fri Jul 20, 2018 06:48 AM	2	411	By Congting Ye on Fri Jul 20, 2018 10:13 AM
the first line "Gene" is NM_003641\|NA\|chr11\|+ ,which lost ‘genename’ By Haifeng Sun on Mon Jul 16, 2018 04:53 AM	2	327	By Congting Ye on Mon Jul 16, 2018 12:21 PM