AmberAnalysis Wiki
Command-line tools for analyzing Amber Molecular Dynamics simulations.
Brought to you by:
larskholte
I'm an undergraduate at Pacific University, and this is a part of my research project in chemistry.
Installation instructions are given in the makefile distributed with the AmberAnalysis package. You will need to have 'make' installed on your system, and you will need to link to the NetCDF (Network Common Data Format, http://www.unidata.ucar.edu/software/netcdf/) libraries.
To graph output files from these programs, you will also have to have a python interpreter with the matplotlib graphing libraries installed (http://matplotlib.sourceforge.net/).