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data
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2015-05-07
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Izaskun Mallona
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[cb7740]
Fixing typo on Active Promoters
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tests
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2014-11-10
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Izaskun Mallona
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[1e0328]
Simplyfing dev tree
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wiki
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2014-07-17
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Izaskun Mallona
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[d055be]
Backing up some templates
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AUTHORS
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2014-01-07
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Izaskun Mallona
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[cefe03]
Sync with the TFC release
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COPYING
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2014-01-08
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Izaskun Mallona
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[14064e]
Adding the FIMO/TRANSFAC TFBS annotation for ea...
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README
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2014-01-07
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Izaskun Mallona
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[cefe03]
Sync with the TFC release
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__init__.py
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2013-12-02
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Izaskun Mallona
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[e04f23]
OOP version
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bedtools_positive_control.R
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2015-10-29
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Izaskun Mallona
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[d39fa1]
Sketching the shuffling validator, still untested
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bedtools_positive_control.sh
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2015-10-29
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Izaskun Mallona
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[d39fa1]
Sketching the shuffling validator, still untested
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bedtools_positive_control_by_chromosome.R
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2015-11-05
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Izaskun Mallona
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[ac3c52]
Sketching a plotter for shuffled bedtools control
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bedtools_positive_control_by_chromosome.sh
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2015-05-29
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Izaskun Mallona
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[bc63b9]
Serializing the positive controls for each chro...
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bedtools_shuffling.R
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2015-11-06
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Izaskun Mallona
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[5ae366]
Violin plots of the shuffled elements
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bedtools_shuffling.sh
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2015-11-13
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Izaskun Mallona
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[ea94ee]
LaTeX trick to annotate the pdftk montages
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bulk_deletion.py
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2014-07-17
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Izaskun Mallona
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[d055be]
Backing up some templates
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formatters.py
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2014-11-10
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Izaskun Mallona
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[d5fd11]
Trying to fix the HMM behaviour
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isodate
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2014-01-13
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Izaskun Mallona
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[fd58db]
Minor
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lister_non_cg_methylation.checker.R
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2014-01-21
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Izaskun Mallona
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[fbf75a]
Closing the lister cg methylation checker
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main.py
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2014-01-07
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Izaskun Mallona
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[cefe03]
Sync with the TFC release
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methylation.py
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2014-01-21
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Izaskun Mallona
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[e4d44c]
Major fixes: meth for all chromosomes and nonCG...
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methylation_utils.sh
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2014-10-16
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Izaskun Mallona
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[d69032]
Avoiding to download meth data for each ontology
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mysql_preformatted_queries.py
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2014-08-05
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Izaskun Mallona
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[6e0d5c]
Parallel version (by chromosome, independent ta...
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ontology_population.py
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2015-03-09
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Izaskun Mallona
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[a5045d]
Positive control using bedtools on usage examples
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parsers.py
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2014-12-23
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Izaskun Mallona
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[00b53b]
Materializing HMM colors as attributes of Alus
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pdf_montage_3_by_3.rb
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2015-11-05
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Izaskun Mallona
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[afea1e]
Plotting histograms with marginals for the shuf...
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rdf_to_smw.py
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2014-07-15
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Izaskun Mallona
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[561d91]
Minor
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rdfio_compliant_formatters.py
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2014-01-07
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Izaskun Mallona
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[2c60da]
Doxygen-like documented code
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rdflib
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2014-01-13
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Izaskun Mallona
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[fd58db]
Minor
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test.py
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2014-01-21
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Izaskun Mallona
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[e4d44c]
Major fixes: meth for all chromosomes and nonCG...
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transfac.py
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2014-01-15
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Izaskun Mallona
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[f349da]
Adding a new class for Lister's methylation int...
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ucsc_mysql_shuttle.py
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2014-10-15
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Izaskun Mallona
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[7e82f8]
Testing a by-chromosome approach
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unix_subprocesses.py
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2014-12-24
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Izaskun Mallona
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[a85f92]
Adding a hard-coded HMM individuals/classes ele...
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utils.py
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2014-01-07
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Izaskun Mallona
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[2c60da]
Doxygen-like documented code
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