BioScope is an application developed for use with SOLiD sequencing platforms developed by Applied Biosystems. This software can be run on a cluster infrastructure or cloud computing configuration. More on this software can be found here.
Also see the following AltAnalyze protocols page ObtainingRNASeqInputs.
Wiki: AltAnalyze
Wiki: BioScope
Wiki: DownloadFASTQ
Wiki: ObtainingRNASeqInputs
Wiki: Tutorial_AltExpression_RNASeq
Wiki: UpdateHistory