Search Results for "data analysis" - Page 50

Showing 2696 open source projects for "data analysis"

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  • 1

    Peptrix

    Label free peptide profiling

    ...Peptrix is able to detect and identify significantly differentially expressed peptides in peptide profiles obtained from body fluids of patient and control groups. The presented modular software is capable of central storage of mass spectra and results in fast analysis. The software architecture consists of 4 pillars 1) a Graphical User Interface written in Java, 2) a MySQL database, which contains all metadata, such as experiment numbers and sample codes, 3) a FTP (File Transport Protocol) server to store all raw mass spectrometry files and processed data, 4) the software package R, which is used for modular statistical calculations, such as the Wilcoxon-Mann-Whitney rank sum test.
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  • 2
    A comparative synteny analysis tool for target-gene SNP marker discovery: connecting genomics data to breeding in Solanaceae * The foundation of this web source is CodeIgniter. * After setting the CodeIgniter framework, unzip it under the default home directory. The database is based on Maria DB (mysql). Download the schema and import it into the DB.
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  • 3

    Call Analytics for Avaya

    Monitor Avaya VDN, ACD and extension objects for call analytics

    Call Analytics tool is a server program that monitors Avaya VDNs, ACD Hunt Groups and Extension objects, it extracts useful information from monitoring events and outputs call and agent records for applications such as reporting, wallboard integration and call log analysis. The Call Analytics tool is a CTI reporting and real time monitoring engine and it is an ideal tool when CMS is not in placed for call center environment.
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  • 4
    This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
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  • 5
    DataScienceR

    DataScienceR

    a curated list of R tutorials for Data Science, NLP

    The DataScienceR repository is a curated collection of tutorials, sample code, and project templates for learning data science using the R programming language. It includes an assortment of exercises, sample datasets, and instructional code that cover the core steps of a data science project: data ingestion, cleaning, exploratory analysis, modeling, evaluation, and visualization. Many of the modules demonstrate best practices in R, such as using the tidyverse, R Markdown, modular scripting, and reproducible workflows. ...
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  • 6
    VAPOR is the Visualization and Analysis Platform for Ocean, atmosphere, and solar Research
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  • 7
    QPROT is a software for differential protein expression using spectral count and intensity data. It also accounts for independent samples and paired samples. The input data should be rolled up to proteins before analysis. Extension to peptide level analysis is in progress.
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  • 8
    MicroCity is a framework for spatial analysis and simulation. It is lightweight, fast, portable, extendable and user friendly. Users can easily operate large GIS and Grid data and perform Spatial, Fractal, Network analysis and simulation.
    Downloads: 2 This Week
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  • 9
    AI learning

    AI learning

    AiLearning, data analysis plus machine learning practice

    We actively respond to the Research Open Source Initiative (DOCX) . Open source today is not just open source, but datasets, models, tutorials, and experimental records. We are also exploring other categories of open source solutions and protocols. I hope you will understand this initiative, combine this initiative with your own interests, and do what you can. Everyone's tiny contributions, together, are the entire open source ecosystem. We are iBooker, a large open-source community,...
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  • 10

    ELINT Alchemist

    Plot, analyse and measure ELINT Time-Based data.

    This program will open an ELINT Time-Based Data (TBD) file and plot it for purposes of measurement and analysis. Test files included. New ver 0.4 added 2018-01-01.
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  • 11
    LithoGraphX

    LithoGraphX

    LithoGraphX, 3D data analysis and visualization

    LithoGraphX is an open source software for scientists, by scientists. It aims at providing the plant science community with a solid, open, community developed, software for 3D data analysis and visualization. LithoGraphX is a fork of the MorphoGraphX project.
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  • 12

    CRISPRamplicon

    A tool for analysis of Genome editing outcomes from sequencing data

    ...Here, a cost-effective and high-throughput strategy was developed for identifying CRISPR/Cas-induced mutations via CRISPR Amplicon Sequencing (Xie’s lab, http://www.biootools.com/). In particular, we have developed a new bioinformatics tool named CRISPRamplicon, which can be used for analysis of CRISPR/Cas9 genome editing outcomes for high-throughput sequencing data with fast speed.
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  • 13

    mapDIA

    Model-based Analysis of quantitative Proteomics data in DIA-MS

    mapDIA performs essential data preprocessing, including novel retention time-based normalization method and a sequence of peptide/fragment selection steps, and more importantly, hierarchical model-based statistical significance analysis for multi-group comparisons under representative experimental designs. The advanced modelling technique also allows the user to incorporate relational information such as existing network data or protein-peptide mapping, enabling module-oriented analysis of differential expression.
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  • 14
    UmUTracker

    UmUTracker

    A MATLAB program for 2D particle tracking or 3D DHM based tracking.

    We present a versatile and fast MATLAB program (UmUTracker) that automatically detects and tracks particles by analyzing long video sequences acquired by either light microscopy or digital holography microscopy (DHM). Our program finds the 2D particle center position using an isosceles triangle transform and the axial position by a fast implementation of Rayleigh-Sommerfeld numerical reconstruction algorithm using a one dimensional radial intensity profile. *Updates v1.1: 2017/11/21- Bug...
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  • 15
    i-Map - Plot Geolocation from Images

    i-Map - Plot Geolocation from Images

    Automatically plots latitude, longitude from images on Google maps.

    ...To generate a report, you can export this data into PDF or Excel file according to your requirements.
    Downloads: 1 This Week
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  • 16
    multiplierz
    Open-source Python software library and GUI desktop environment for direct bioinformatic analysis of mass-spectrometry data through powerful scripting tools and interfaces to many machine data formats, database search engines, and peptide data formats. For a copy of the source code, check out our Github repositories: mzDesktop: https://github.com/MaxAlex/mzDesktop multiplierz: https://github.com/MaxAlex/multiplierz
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  • 17
    electron-webpack-dashboard

    electron-webpack-dashboard

    Electron Desktop GUI for Webpack Dashboard

    ...The original dashboard felt like working at NASA. 50 years ago. I hope this dashboard feels like working at NASA today. Or at Westworld. Or like the beginning of Westworld at least. To receive a complete analysis of your bundle, including modules, assets, and problems, you will need to make sure your project is using Webpack Dashboard Plugin 1.0 or higher. Simply hit save on a project running webpack-dev-server, or run your build task that builds with webpack and providing you have configured your project as shown above, you should see the dashboard start to display data.
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  • 18
    DatacenterManager

    DatacenterManager

    UNIX Performance Monitoring / Trend Analysis Java Software

    Remotely Inventory and Poll UNIX servers in seconds. (without installing extra software on your servers, just by SSH communication plain old UNIX commands).https://sites.google.com/site/ronuitzaandam/ Your entire datacenter can be automatically inventoried by supplying hostname, username & password for each server, either “one by one” or via an automated CSV host-list import file. This software goes great with other UNIX software like WinSCP and Putty etc !!!
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  • 19
    CognitionMaster

    CognitionMaster

    object-based image analysis framework

    Wienert S, Heim D, Kotani M, Lindequist B, Stenzinger A, Ishii M, Hufnagl P, Beil M, Dietel M, Denkert C, Klauschen F. CognitionMaster: an object-based image analysis framework. Diagn Pathol 2013, 8:34
    Downloads: 1 This Week
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  • 20

    PhotonLoop

    Adaptive Optics Measurement and Correction Software

    Adaptive Optics Measurement and Correction Software
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  • 21

    Canvas-2DGC

    A user-extensible Freemat based 1DGC and GCxGC data analysis software.

    Canvas-2DGC is a user-extensible, Freemat based 1DGC and comprehensive 2DGC (GCxGC) data visualization and processing software. GCxGC-MS data analysis is supported for Agilent GCMS data format. The first goal of this project is to provide a highly intelligent analytical tool for reducing a complex chromatographic data analysis, either 1D or 2D, to just a few simple and intuitive steps. The second goal is to provide a fast and practical way of customizing or extending functionalities by ordinary users through high-level Freemat scripting. ...
    Downloads: 2 This Week
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  • 22
    GlycoPAT

    GlycoPAT

    Comprehensive, open-source tool for glycoproteomics MS data analysis

    GlycoPAT is a modular, open-source MATLAB based toolbox for shotgun mass spectrometry based glycoproteomics data analysis. This program provides a novel platform for the streamlined analysis of traditional LC-MSn based high-throughput experimental data for the identification of site-specific N- and O-linked glycosylation on various proteins. More details are available at https://www.VirtualGlycome.org/glycopat Source code also available at https://github.com/kaichengub/GlycoPAT If you use this software please cite: Gang Liu, Kai Cheng, Chi Y. ...
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  • 23
    As a library of classes for generating and manipulating music and sound, jMusic provides a solid framework for computer assisted composition in Java. jMusic has a music data structure based upon note/sound events and methods for modifying and structu
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  • 24

    canova

    Efficient Test for Nonlinear Dependence of Two Continuous Variables

    Testing dependence/correlation of two variables is one of the fundamental tasks in statistics. We focus on testing nonlinear dependence/correlation of two continuous variables (X and Y). We address this problem by a framework named CANOVA (continuous analysis of variance). In the CANOVA framework, we first define a neighborhood of each data point according to its X value, and then calculate the variance of the Y value within the neighborhood, finally perform a permutation test for the significance of the observed within neighborhood variance. CANOVA is efficient in testing nonlinear correlation and has its own advantages in real data applications.
    Downloads: 1 This Week
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  • 25
    VSceneGIS Project

    VSceneGIS Project

    VSceneGIS Desktop. (GIS) Analysis, Computing and Editing

    Customer Project Development, Analysis, Computing and GIS editing. VSceneGIS Desktop applies the concept of Tree and Graph Topology to implement the data model in a GIS. Cliente para el desarrollo de Proyectos, Análisis, Cómputo y Edición SIG. La plataforma VSceneGIS, aplica el concepto de Árbol y Grafo Topológico para implementar el modelo de datos en un SIG.
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