Search Results for "draft" - Page 4
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Showing 157 open source projects for "draft"
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ImproveAssembly
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0206
...This is also observed for complete genomes. Thus, we developed ImproveAssembly, a tool capable of identifying new products missing from genomic sequences, which can be used for complete and draft genomes. The identified products can improve the annotation of complete genomes and drafts while significantly reducing the bias when the information is used in other omics analyses. -
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DougsDraftBuddy
MTGO Draft Assistance and Post Draft Analysis
DougsDraftBuddy is a small program that gives you exactly the information you'd like while you're doing a draft. Card rating, rank, price, and description are all available with easy input. Then once the draft is over DougsPostDraftAnalyzer will tell you if you were in the right colors! This will be useful for returning players who want to improve their draft performance with data and for new players who want some guidance in an unfamiliar set or limited format View it in action!! ... -
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CUED PhD thesis template
A LaTeX / XeLaTeX / LuaLaTeX PhD thesis template
...A separate abstract with thesis title and author name, along with the title page can be generated by passing the argument abstract to the document class. Option to generate only specific chapters and references without the frontmatter and title page. Useful for review and corrections. Draft mode: Draft water mark, timestamp, version numbering, and line numbering. -
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GapBlaster
Semiautomated gap closing tool
GapBlaster is a software that aims at providing a simple graphical user interface for closing genome gaps. It allows the curation of the gaps that will be closed, thus improving the quality of draft genomes. User Guide: https://sourceforge.net/projects/gapblaster2015/files/GapBlaster_manual_v2.pdf/ -
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jsondata
Modular JSON by trees and branches, pointers and patches
... - JSONDataSerializer - Core for RFC7159 based data persistence. Provides modular data serialization. - JSONPointer - RFC6901 for addressing by pointer paths. Provides pointer arithmetics. - JSON Relative Pointer - draft-handrews-relative-json-pointer/2018, contained in JSONPointer. - JSONPatch - RFC6902 for modification by patch lists. Provides the assembly of modular patch entries and the serialization of resulting patch lists. - JSONDiff - Diff utility for JSON data. - JSONSearch - Search utility JSON patterns. Online documents: https://jsondata.sourceforge.io/ -
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PyTorch Book
PyTorch tutorials and fun projects including neural talk
This is the corresponding code for the book "The Deep Learning Framework PyTorch: Getting Started and Practical", but it can also be used as a standalone PyTorch Getting Started Guide and Tutorial. The current version of the code is based on pytorch 1.0.1, if you want to use an older version please git checkout v0.4or git checkout v0.3. Legacy code has better python2/python3 compatibility, CPU/GPU compatibility test. The new version of the code has not been fully tested, it has been tested... -
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Jocko
Kafka implemented in Golang with built-in coordination
...Able to use percentages of disk space for retention policies rather than only bytes and time kept. Handling size configs when you change the number of partitions or add topics. API versioning [more API versions to implement]. Replication [first draft done - testing heavily now]. Partition consensus and distribution. -
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PBSuite
Software for Long-Read Sequencing Data from PacBio
.... ----- PBJelly ----- Read The Paper http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0047768 PBJelly is a highly automated pipeline that aligns long sequencing reads (such as PacBio RS reads or long 454 reads in fasta format) to high-confidence draft assembles. PBJelly fills or reduces as many captured gaps as possible to produce upgraded draft genomes. ----- PBHoney ----- Read The Paper http://www.biomedcentral.com/1471-2105/15/180/abstract PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). ... -
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GapBlaster
Semiautomated gap closing tool
GapBlaster is a software that aims at providing a simple graphical user interface for closing genome gaps. It allows the curation of the gaps that will be closed, thus improving the quality of draft genomes. User Guide: https://sourceforge.net/projects/gapblaster/files/User_Guide/ -
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Envelope Templates Designs for MS Word
Envelope Templates in Editable Version for MS Word Software
Envelopes are needed everywhere by many of people. Either working at home or being at office one always need envelopes to draft personal or official documents. Now with the help of given templates, one can design his/her own envelope in no time. Given are 40 template designs and still much more can be made with just little customization. -
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MultiCellDS
MultiCellular Data Standards Project
...A novel part of MultiCellDS is the digital cell line: a digital analogue of experimental cell lines that will help to collect biophysical cell line measurements coming from many research groups and make them readily accessible to an ecosystem of compatible computational models. You can learn more about digital cell lines and other core ideas on this page. We are currently preparing a draft of the upcoming MultiCellDS 1.0. -
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OBP-API (Open Bank Project API)
An open source RESTful API platform for banks
OBP-API is an open-source banking platform that exposes a comprehensive REST/JSON API for accounts, transactions, payments, KYC, and related banking resources. It’s designed to help banks and fintechs implement secure, permissioned access to financial data while aligning with open-banking and PSD2-style workflows. The platform includes fine-grained roles, consents, and entitlements so institutions can control who can see or act on specific resources, down to individual endpoints and fields.... -
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...Credential assertions, which also serve the role of certificates, have the same syntax as policy assertions but are also signed by the principal delegating the trust. This is an example implementation of the KeyNote Trust-Management System as specified in IETF draft <draft-blaze-ietf-trustmgt-keynote-02.txt>. WWW: http://www1.cs.columbia.edu/~angelos/keynote.html
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iCAS - An Illumina Clone Assembly System
An Illumina clone assembly system using SOAPdenovo and ABySS
...With iCAS the data filtering process is based on a novel kmer frequency algorithm, resulting in near perfect pre-assembly reads. Contigs are generated using different assembly algorithms and then merged together to achieve longer continuity. Re-aligning all the reads back to the draft contigs and recalibrating each sequence base achieves a final consensus. Using finished clones for QC, the pipeline is able to obtain assemblies with clone coverage of 99.7% and consensus base quality of Q39. Developed at the Wellcome Trust Sanger Institute. -
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JBulkMailer
The JBulkMailer is client application, you can send bulk of emails...
The JBulkMailer is email client application but not similar to email client application. JBulkMailer a part or main module of email client application. In which email client application you can send, receive, draft, spam, trash email. But in JBulkMailer you can send bulk of emails. In JBulkMailer receiver (with Sole Representation), that send email to each user individually not use CC or BCC email fields. -
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Scaffold_Builder
Combining de novo and reference-guided assembly with Scaffold_builder
Scaffold_builder is software to order contigs generated by draft sequencing along a reference sequence. Gaps are filled with N's and small overlaps are aligned with Needleman–Wunsch algorithm and the consensus created with IUPAC codes. Scaffold_builder can help in the assembly and annotation of genomes by revealing what is missing and allowing targeted sequencing to close those gaps. (c) Silva GG, Dutilh BE, Matthews TD, Elkins K, Schmieder R, Dinsdale EA, Edwards RA. ... -
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Network of Information
Information Centric Networking using the NetInf paradigm.
This project hosts code and information for various packages implementing or using the Network of Information paradigm. The software provides implementations of the NI naming scheme (draft-farrell-decade-ni) and other NetInf features (such as convergence layers, forwarding, caching) in different languages, including C, Clojure, Java, PHP, Python, and Ruby. It also contains additional tools such as patches to curl and wget and shells scripts for web server support. -
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PHP Draft
Web based fantasy sports draft app
Version 2.0 is here - for source code and releases, please see the new project page on Github, or sign up for your own account at phpdraft.com! Atlassian Bitbucket is awesome and is not the reason for the switch at all (Sourceforge is). For all future development, please follow the project on Github. -Matt -
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PanCoreGen1
A comprehensive tool to profile, detect & annotate microbial genomes.
PanCoreGen is a Windows-based standalone tool offering 4-in-1 functionalities – (i) pan-/core-genomic profiles across the entire sample set; (ii) similar profiles within user-defined strain-groups; (iii) annotations of user-provided draft genomes; and (iv) detection of unidentified genes in annotated genomes. -
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LDWM: Hash-Based Signatures (draft-mcgrew-hash-sigs-02), PHP implementation of IETF pqcrypto algorithm specification
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Z4 Phreak Tools 2.3
Modify Request and Response Header
...- Fixed bugs Traffic - Fixed bugs Dialer - Fixed bugs Set Proxy IDM - Change Proxy Server (with listview) - Fixed bugs Query (add use query mode only) - Add New User-Agent to Query (SonyEriccson, NOKIA, Opera Mini, and Custom) - SMS (Create, Inbox, Outbox, Draft, Kontak) - Diagnostics Modem (Operator, Speed, RSSI, MCC, MNC, LAC, Cell ID, QoS, Sent, Recieved) - Set Network Type modem (3G Only, 3G Preferred, Edge Only, Edge Preferred) - Move Apps to main menu file (Tools > Apps External) - Move +Header to Header (in Manual mode configuration header) - Fixed bugs Lock GUI - Change main menu MDMA to PING - Fixed bugs GUI Header Log - New Icon for Change icon button - Add Updater - Fixed location tor.exe - Fixed Redial/ Reconnect (with count dial attemps) - Fixed Properties Modem (add number dial, use dns, disable netbios) Regards, Author : zaya razta (z4y4@bugs4u) -
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Save Web Page Inputs
Save user inputs into web a page
...An AppleScript called replaceHtml.scpt calls getNewHtml(), and sets string_to_write to the content of an .html file. The AppleScript then write the string to a TextWrangler file. This is a first rough draft of the JavaScript and AppleScript, but both work now. -
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Hyperic Google map plugin
Display resources with location property in Google map
A Hyperic HQ UI plugin to display the resources with location property in a google map. This is only a draft. Please visit http://www.innovatedigital.com/en/node/1005 or wiki page for more details. -
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busilet
Busilet is a reference implementation of IDTP and UTID.
...The IDTP (Identifier Tracing Protocol) is a communication protocol to access the information of a thing that identified by UTID. The IDTP and UTID were designed by the author of the Busilet project in recent three years. For more information, see: https://datatracker.ietf.org/doc/draft-huangng-idtp/ https://datatracker.ietf.org/doc/draft-huangng-utid/ Project Busilet is a reference implementation of IDTP that provides a set of APIs developers to develop IDTP server and IDTP client software. Busilet4j is written in Java language and is for Java programmer to develop IDTP server and IDTP client software. The documents include IDTP specification v0.95 both in English and Chinese edition, an API specification in English only, all source code in Java, and a set of JUnit tests. ... -
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HOBA - No Passwords at all!
HTTP Origin Bound Authentication (HOBA)
An implementation of http://tools.ietf.org/html/draft-ietf-httpauth-hoba that allows users to do web authentication without any passwords at all. This is for web site admins. Main client is JS. Check it out at https://hoba.ie/
