Search Results for "data structure" - Page 30
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Showing 1040 open source projects for "data structure"
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Orbus MVC
A fast and easy PHP MVC framework
This project aims to create a simple and useful MVC structure for rapid development of aplications in PHP. The second goal is to provide a solid layout to improve the user interface too. For while, only in Portuguese (BR). Please send questions to magno.mabreu@gmail.com -
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DDMsuite
Derivative Difference Minimization Program
DDM program is designed for crystal structure analysis from powder diffraction data by making use of either Rietveld or Derivative Difference Minimization (DDM) method. In the DDM method the refinement is aimed not at minimizing the absolute difference between the experimental and calculated profiles but at minimizing the oscillations (or curvature) of the difference curve. -
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StabLe
An algorithm for learning stable graphical models from data
Stable Graphical Model Learning (StabLe) is an algorithm for learning the structure and parameters of stable graphical (SG) models from data. Stable random variables are motivated by the central limit theorem for densities with (potentially) unbounded variance and can be thought of as natural generalizations of the Gaussian distribution to skewed and heavy-tailed phenomenon. SG models are multi-variate stable distributions that represent Bayesian networks whose edges encode linear dependencies amongst random variables. ... -
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AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets.
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Calculates Natural Product(NP)-likeness of a molecule, i.e. the similarity of the molecule to the structure space covered by known natural products. NP-likeness is a useful criterion to screen compound libraries and to design new lead compounds. Maven dependancy: <dependency> <groupId>uk.ac.ebi.cheminformatics</groupId> <artifactId>NP-Likeness</artifactId> <version>2.1</version> </dependency> Required repository: <repositories> ...
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ProximityForest
Efficient Approximate Nearest Neighbors for General Metric Spaces
A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. -
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Multi-Column Row Comparator
Provides multi-column sort capabilities for row-based text file data
...The compare method assumes String arguments which are tokenized. These tokens represent the individual columns that are to be sorted based on rules that are injected prior to execution. The data structure of the file is also defined prior to execution. This implementation sorts the following column data types: - java.lang.String - java.Math.BigInteger - java.Math.BigDecimal - org.joda.time.DateTime Columns are sorted based on specified attributes, some of which are type specific. For example: - Treat Null as Low Sort Order (boolean) - Ascending Order (boolean) - DateTime Pattern (String) - BigDecimal Scale (integer) ... and others -
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q pipeline manager
q: integrated platform for pipeline configuration and management
The q utility is a platform for creating and managing data analysis pipelines. It expands the value of your existing job scheduler - either Grid Engine or TORQUE PBS - through numerous functions that help you organize, submit, monitor, manage and share your informatics work. Data processing pipelines require high-level organization and parallelization of work to optimize resource utilization and decrease the time to results. q (from queue) allows complex job sequences to be efficiently... -
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SPE Toolbox
MatLab functions for reading WinView/WinSpec .spe files
This toolbox is a collection of MatLab functions for reading WinView/WinSpec files (.spe extension) directly to MatLab. It provides functions for reading full header from file into a structure, reading frames into matrices, and reading pixel values across all frames. You can use these functions to analyse and process experiment data stored in .spe files in MatLab, and to write functions to export .spe files to animated GIFs for use in presentations. Also includes simple MatLab application for converting files to GIF, AVI and .spe files, and provides functionality for quick addition of support for WinView-like formats by users, without the need to call developers. -
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drvq
dimensionality-recursive vector quantization
drvq is a C++ library implementation of dimensionality-recursive vector quantization, a fast vector quantization method in high-dimensional Euclidean spaces under arbitrary data distributions. It is an approximation of k-means that is practically constant in data size and applies to arbitrarily high dimensions but can only scale to a few thousands of centroids. As a by-product of training, a tree structure performs either exact or approximate quantization on trained centroids, the latter being not very precise but extremely fast. ... -
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This library implements a thread-safe skip list data structure - a kind of list with good insertion, deletion and searching performances. It uses Fred Fish's dbug library as internal tracing/debugging system. See the web site for more details.
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SecStAnT
Secondary Structure Analysis Tool for data selection and statistics
SecStAnT is a tool for the automatic creation of data-sets of structures from Protein Data Bank (PDB) with user-defined structural composition, and for the calculation of their internal variables distributions. SecStAnT is able to 1. Select from PDB data sets of structures based on user specified secondary structures (defined based on internal PDB classification or on DSSP) and/or sequence motives. 2. Build Data-sets at different levels of resolution (all atoms, only backbone, only... -
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nacho
Python micro web-framework and asynchronous networking library
...Because it encourages consistency among services, teams can spin up new microservices with a shared structure and skip repetitive setup. Though the repository may be less active than some major frameworks, it serves as a valuable jump-start for projects where speed and uniformity matter. -
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Nuclei
Feature rich GUI for nuclear decay schemes
Nuclei is a software tool for the displaying of nuclear decay schemes and estimated energy spectra, the calculation of angular γ emission anisotropies, and the automated search for appropriate decay cascade properties. It uses the Evaluated Nuclear Structure Data Files (ENSDF). A description of Nuclei's functionality and results obtained using its search method was published in Nuclear Instruments and Methods in Physics Research, Section A: M. Nagl, et al., NIM A 726 (2013), 17-30 [doi:10.1016/j.nima.2013.05.045] ------------------------- © 2012-2013, Matthias Nagl, II. ... -
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Unsupervised TXT classifier
Classify any two TXT documents, no training required - JAVA
...This extracts a relevant structure for both documents (and thus avoids the over-training) which are then compared using the Vector-Space analysis to give a range of belonging of one document to another (and thus avoids the shortage of information). This method can be used to create the user-defined classes by merging texts of certain categories and then to calculate the relevant distances between the documents, but this is not necessary. -
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virHap
A Software package for Inferring the haplotype structure of a mixed vi
PhyVar is an open-source software package for viral quasi-species reconstruction, which makes use of a novel phyloprobabilistic approach to infer the sub clonal composition and evolutionary history of a viral population from NGS data. The program aims to characterize and quantify the composition, the abundance and the evolutionary path of the underlying viral population within a given host by analyzing Next Generation Sequencing data. The program takes as input the collection of reads... -
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data2bin
Create structured binary files from XML data.
...Your data in a XML file written down according to defined structure. ... and produces final binary file. It is able to pad Your strings with defined padding, check Your integers' sizes, it can fill default values where You didn't supply data, it can also, for example, put a "blank" array member at the end of an array etc. Whenever You change your structure in Your code, just update the data-description file and "rebuild" Your binary files without touching XML data files! -
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Database to CSV
"Database to CSV" project stores/loads data between database and CSVs
"Database to CSV" allows to back-up data from database(Oracle, MySQL, SQL Server) in the form of CSV files. Each table data is stored in a separate CSV file. It also allows to load data from CSV files into the database. Program can be run from UI or from command line. There's one more advanced feature which allows merging of data from CSV file to Database. It is only available from command line. (It will take foreign keys and unique keys into consideration and then try to insert... -
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Simplicial
A C++ framework for simplicial meshes of arbitrary dimension
Simplicial provides a framework to work with simplicial meshes of arbitrary dimension. The data structure is "layered" so that any sort of homogeneous mesh can be represented. A specialized structure allows the representation of meshes with explicit adjacency information between top simplexes. Also, a further specialized structure allows the representation of so-called "liquidus" hypersurfaces that describe the behaviour of multi-component materials. ... -
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All About Data Structures
Sorting Searching List Template All
This will help a new data structure learner to learn data structures quickly. -
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KochCurve
This small library implements a data structure for Koch curves.
This small library implements the Koch curve, snowflake and anti-snowflake like a Shape to be used like any other Java shape. You can test the library by compiling the test applet in Files. -
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Systems Glycobiology
Glycosylation Network Analysis Toolbox (GNAT)
...The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional features that are geared towards incorporating glycan-structure experimental data into the simulation environment. For information about GNAT installation and usage, please see the GettingStarted.pdf file enclosed in the package. To cite GNAT: [1] Gang Liu, Apurv Puri and Sriram Neelamegham, Glycosylation Network Analysis Toolbox (GNAT): a MATLAB based environment for systems glycobiology, Bioinformatics 2013 29: 404-406 -
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school Managment portal
A comprehensive School Managment Application
It’s a user friendly software with navigational tools which makes it appealing, attractive and easy to use. Each user has specialized user interface with access only to operations that are permissible to the specific user as allotted by the administrator. Developed with modern technology with the highest level of ethical standards and robust enough to accommodate the Nigerian, British and American curriculum. Updates and upgrades will be developed in cognizance with the structure of... -
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cvsba
OpenCV wrapper for sba library
...The main features are: - Based on sba-1.6, one of the most popular and robust bundle adjustment implementation, which is extensively used and tested by the community - sba installation is not needed since it is included in cvsba - New CMake structure which makes the library compilation, installation and linkage easier - Similar interface than Bundle Adjustment implementation on cv::LevMarqSparse::bundleAdjust() - Include examples to test the library on synthetically generated data - GPL licence
