Showing 188 open source projects for "quantitative"

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    CometAnalyser

    CometAnalyser

    CometAnalyser, for quantitative comet assay analysis.

    Description: Comet assay provides an easy solution to estimate DNA damage in single cells through microscopy assessment. To obtain reproducible and reliable quantitative data, we developed an easy-to-use tool named CometAnalyser. CometAnalyser is an open-source deep-learning tool designed for the analysis of both fluorescent and silver-stained wide-field microscopy images. Once the comets are segmented and classified, several intensity/morphological features are automatically exported as a spreadsheet file. ...
    Downloads: 10 This Week
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  • 2
    ColorI-DT

    ColorI-DT

    A tool for the quantitative evaluation of differences in color images

    ...Contacts: Filippo Piccinini (emails: filippo.piccinini@irst.emr.it; f.piccinini@unibo.it) Repository: https://sourceforge.net/p/colori-dt/ How to cite us when using the tool: Filippo Piccinini et al. “Colori-DT: an open-source tool for the quantitative evaluation of differences in microscopy color images”.
    Downloads: 0 This Week
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  • 3
    ...Researchers, engineers, and professionals handling French groundwater and water quality data. Anyone who wants a faster way to explore, visualize, and analyze ADES ZIP files. Key Features: 📂 Load ADES ZIP files instantly 📊 Visualize quantitative and qualitative water data 💾 Export results to Excel for further analysis 🔍 Automatic statistical summaries for piezometric and water quality parameters 🖥️ User-friendly interface with intuitive navigation and clear graphs Analysis Highlights: Quantitative trends: Track water levels over time, analyze NGF heights, and visualize availability. ...
    Downloads: 2 This Week
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  • 4

    AQUAD

    Software for Analysis of Qualitative Data

    ...The modules follow the coding paradigm of qualitative analysis, offering for text analysis also functions for sequence analysis (Objective Hermeneutics) and word based quantitative analysis.
    Downloads: 2 This Week
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    FlowSignal

    FlowSignal

    Real-time crypto market microstructure analysis tool

    ...The system generates a signal (LONG or SHORT) with specific entry zone, stop-loss level (~1%), and two take-profit targets. FlowSignalis designed for crypto scalpers and day traders who want a quantitative "second opinion" based on market microstructure data, complementing traditional chart analysis. IMPORTANT DISCLAIMER: This is a technical analysis tool, not financial advice.
    Downloads: 0 This Week
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  • 6
    ...Author: Hemi Luan Maintainer: Hemi Luan Citation (from within R, enter citation("statTarget")): Luan H, Ji F, Chen Y, Cai Z (2018). “statTarget: a streamlined tool for signal drift correction and interpretations of quantitative mass spectrometry-based omics data.” Analytica Chimica Acta, 1036, 66-72.
    Downloads: 0 This Week
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  • 7
    AnaSP

    AnaSP

    AnaSP, a MATLAB software suite to ANAlyse SPheroids' features

    Today, more and more biological laboratories use 3D cell cultures and tissues growth in vitro as model of in vivo tumours and metastasis. However, a lack of methods for quantitative analysis, limits the usage of spheroids as model for routine experiments. AnaSP is a suite tool for automatic analysis of morphological parameters of spheroids starting by brightfield images manually acquired with a standard widefield microscope. AnaSP is distributed as an open source software tool, and its modular architecture and graphical user interface make it attractive also for non-Computer Scientist people, and suitable for both high content screenings and occasional spheroid-based experiments. ...
    Downloads: 14 This Week
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  • 8
    ...The individual-level model is extended based on the well-known social force model, and it mainly describes how agents/particles interact with each other, and also with surrounding facilities including obstructions and passageways. Most importantly, we introduce a set of arrays to define social relationship of agents/particles in a quantitative manner. Opinion dynamics is integrated with force-based interaction to study complex social phenomena including path-selection activities, social group and herding effect. Very interestingly, the interaction of such agent/particles are not only at physics-level, but at consciousness and unconsciousness level by integrating advanced social-psychological studies.
    Downloads: 0 This Week
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  • 9
    crowdEgress

    crowdEgress

    Complex systems of social groups with opinion exchange

    ...The problem is complex because opinions and actions are described as different features for each individual, and opinions interact and shape action with a time delay. The social topology among individuals is described by a set of matrices, which provide quantitative measures of their social relationship. Opinion exchange is integrated in context of their social interaction.
    Downloads: 0 This Week
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  • 10

    DataPrep

    Python-based data preprocessing tool

    DataPrep v0.2 is a Tkinter-based GUI application/tool designed to assist users in data preprocessing, multicollinearity removal, and feature selection for a wide range of applications in Cheminformatics, Bioinformatics, Data Analysis, Feature Selection, Molecular Modeling, Machine Learning, and Quantitative-structure-property relationship (QSPR) studies. It includes functionality to load, process, and save datasets with support for different preprocessing & multicollinearity removal strategies with customizable parameter setting options.
    Downloads: 2 This Week
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  • 11
    Croizat

    Croizat

    A software package for quantitative analysis in Panbiogeography

    Croizat is a free, user-friendly, cross-platform desktop software package which biologists can use to integrate and analyze spatial data on species or other taxa and to explore geographical patterns in diversity under a panbiogeographic and graph-theoretic approach.
    Downloads: 0 This Week
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  • 12
    Criterial

    Criterial

    The package for statistical data analysis and applied mathematics

    Putting truth before show-off. Criterial is an add-in for desktop versions of LibreOffice Calc (and forks) for statistical data analysis. The project is built on the refined expertise and core concepts of the AtteStat and StatAnt projects. Completely free. No donations required. Comes with absolutely no warranty. Rating: Everyone (All ages). MEDICAL DISCLAIMER: This software is not certified for use in healthcare and should not be used for diagnostic or treatment purposes. NOTICE FOR EU...
    Downloads: 12 This Week
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  • 13
    Chem-Parser

    Chem-Parser

    Molecule Sketcher and Immediate Parser to Excel, .SMI and 3D SDF

    Chem-Parser is an intuitive and efficient utility designed to streamline the data curation process for QSAR (Quantitative Structure–Activity Relationship) modeling and cheminformatics workflows. This versatile tool allows users to draw chemical structures, parse multiple SMILES strings, and automatically populate a structured table with associated compound names and custom-defined value tags such as biological activity or physicochemical properties.
    Downloads: 4 This Week
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  • 14
    StatAnt

    StatAnt

    The package for statistical data analysis

    Aspire to perfection. StatAnt is a standalone cross-platform application for statistical data analysis. Completely free. No donations required. Comes with absolutely no warranty. Rating: Everyone (All ages). MEDICAL DISCLAIMER: This software is not certified for use in healthcare and should not be used for diagnostic or treatment purposes. NOTICE FOR EU RESIDENTS: This software is NOT compliant with EU regulations, including GDPR and the AI Act. It is not intended for use within the...
    Downloads: 5 This Week
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  • 15
    Libro

    Libro

    An interactive program for statistical analysis of texts

    A cross-platform text analysis program written in Python and Free Pascal/Lazarus which scans a whole text file (in plain text, HTML, EPUB, or ODT formats) and ranks all used words according to frequency, performing a quantitative analysis of the text using Shannon-Weaver information statistic and Zipf power law function. It counts words, sentences, chars, spaces, and syllables. Also computes readability indexes (Gunning-Fog, Coleman-Liau, Automated Readability Index (ARI), SMOG grade, Flesch–Kincaid grade level and Flesch Reading Ease).
    Downloads: 1 This Week
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  • 16
    JRC QSAR Model Database

    JRC QSAR Model Database

    (Q)SAR Model Reporting Format Inventory

    In the regulatory assessment of chemicals (e.g. under REACH), Quantitative Structure Activity Models (QSAR) are playing an increasingly important role in predicting properties for hazard and risk assessment. This implies both a need to be able to identify relevant QSARs and to use them to derive estimates and/or have access to their precalculated estimates. To help meet these needs, the JRC QSAR Model Database is established and freely accessible through http://qsardb.jrc.ec.europa.eu/qmrf The QSAR Model Reporting Format (QMRF) is a harmonised template for summarising and reporting key information on QSAR models, including the results of any validation studies. ...
    Downloads: 4 This Week
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  • 17
    Gemi

    Gemi

    PCR primers / probes design from multiple & degenerate sequences

    ...https://sites.google.com/view/hsa23/ Gemi, an automated, fast, and easy-to-use bioinformatics tool with a user-friendly interface to design primers and probes for polymerase chain reaction (PCR). Gemi accepts multiple aligned and long DNA and RNA sequences with degenerate nucleotide (non-A/C/G/T bases). Gemi can be used for quantitative, real-time and conventional PCR (qPCR, rt-PCR, etc.), and Sanger sequencing. Gemi can parse large dataset of sequences efficiently. Python codes can be supported upon request. Article: Gemi: PCR primers prediction from multiple alignments Comparative and functional genomics 2012;2012:783138 DOI: https://doi.org/10.1155/2012/783138 PMID: https://www.ncbi.nlm.nih.gov/pubmed/23316117 PMCID: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3535827/
    Downloads: 1 This Week
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  • 18
    WoPeD
    WoPeD is a Java-based graphical workflow process editor, simulator and analysor using Petri Nets and supporting the PNML format.
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    Downloads: 201 This Week
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  • 19

    OptiMIClass

    Automatic n-dimensional data clustering tool powered by five advanced

    This software is an automatic n-dimensional quantitative data clustering tool based on five optimization heuristics (GA, PSO, ACO, SA, and TS). It enables performance comparisons across heuristics and parameter testing within each method, analyzing solution quality, runtime, and convergence; it also includes a repository of benchmark test tables and an intuitive interface for research and operational use.
    Downloads: 0 This Week
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  • 20

    From FBA to self-contained models

    Methodology to create self-contained models for cellular systems

    ...It delves into thermodynamic properties and introduces methods for a proper description. Conforming to the dimensions mentioned earlier, the tutorial confines itself to detailed quantitative models for an average cell, analyzing static properties. In all cases, one (or two) objective functions are utilized to yield meaningful solutions. The examples provided adhere strictly to quantitative principles, employing physiologically meaningful parameters and standard units such as g grams, mol moles, g\, DW grams of dry weight (gDW), and h hours for time constants. ...
    Downloads: 0 This Week
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  • 21
    Artifact GeoMorph Toolbox 3D 3.1

    Artifact GeoMorph Toolbox 3D 3.1

    A toolbox for 3DGM shape analysis of archaeological artifacts

    ...As such, the toolbox contains an automated item and semi-landmarks positioning procedure and the fundamental statistical analyses and procedures to allow the processing and analysis of the data. It is designed to be easy to use and straightforward with a simple graphical user interface. Furthermore, it provides direct, quantitative and objective results to answer common archaeological research questions with regards to artifact shape variability.
    Downloads: 6 This Week
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  • 22
    QuantResearch

    QuantResearch

    Quantitative analysis, strategies and backtests

    QuantResearch is a large educational repository dedicated to quantitative finance, algorithmic trading, and financial machine learning research. The project contains numerous notebooks and research materials demonstrating quantitative analysis techniques used in financial markets. These include implementations of factor models, statistical arbitrage strategies, portfolio optimization methods, and reinforcement learning approaches to trading.
    Downloads: 0 This Week
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  • 23
    fastquant

    fastquant

    Backtest and optimize your ML trading strategies with only 3 lines

    fastquant is a Python library designed to simplify quantitative financial analysis and algorithmic trading strategy development. The project focuses on making backtesting accessible by providing a high-level interface that allows users to test investment strategies with only a few lines of code. It integrates historical market data sources and trading frameworks so that users can quickly build experiments without constructing complex data pipelines.
    Downloads: 0 This Week
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  • 24
    quantitative

    quantitative

    Quantized transactions python3

    The “quantitative” repository by Jack-Cherish is a tutorial-style codebase for quantitative trading written in Python — essentially a learning resource that guides users through building algorithmic trading strategies step by step. It’s organized as a sequence of lessons (lesson1, lesson2, etc.), making it approachable for learners who want to understand both theory and practice in quantitative finance.
    Downloads: 0 This Week
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  • 25
    Classsroom-Insights
    ...This software features multiple tools to provide the teacher with a unique perspective on their students' performances across evaluations. This software makes use of quantitative and graphical methods to provide insights. As a bonus, Classroom Insights is designed to allow for archiving statistics per sequence into a database file that can be shared with other colleagues for a more comprehensive perspective on performance. Furthermore, this software leverages the power of machine learning to predict students' performances on exams.
    Downloads: 0 This Week
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