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The TErminology for the Description of DYnamics (TEDDY) project aims to provide an ontology for dynamical behaviours, observable dynamical phenomena, and control elements of bio-models and biological systems in Systems Biology and Synthetic Biology.
The Semantic Application Design Language (SADL) expresses domain knowledge as semantic models and rules. The SADL-IDE (integrated development environment) is an Eclipse plug-ins for editing SADL, converting to OWL, and testing using Jena or Pellet.
AMELiA is a collection of libraries developed at the Arts, Media and Engineering Program at Arizona State University. It includes the AME Patterns library, a generic C++ library for modeling, recognition and synthesis of sequential patterns.