Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
Desktop search application
DocFetcher is an Open Source desktop search application: It allows you to search the contents of files on your computer. — You can think of it as Google for your local files. The application runs on Windows, Linux and Mac OS X.
One hundred command line tools in a small and portable binary.
Create zip files, extract zip files, replace text in files, search in files using expressions, stream text editor, instant command line ftp and http server, send folder via network, copy folder excluding sub folders and files, find duplicate files, run a command on all files of a folder, split and join large files, make md5 checksum lists of files, remove tab characters, convert CR/LF, list newest or biggest files of a folder, compare folders, treesize, show first or last lines of a file, find filenames fast using index files, rename many files using expressions, copy part of a file, change times of a file, set file time from filename, print colored text to terminal, convert csv to tab separated, download files from web, send http or udp requests, print tcp or udp traffic, create hexdump of files, join many text files into one, list nested .zip .tar .tar.gz .tar.bz2 archive contents. Fully portable, for USB stick, without installation. For Windows, Linux and Mac OS/X.
Powerful desktop search app for Windows, Linux and Mac
Power searching on your desktop without the pain. Perform powerful desktop searches without having to index your system using regular expressions. Graphical equivalent to find/grep. Available for Windows (JAVA) and Linux (Gnome & KDE) and easy to translate into your locale.
Launchy is a free utility designed to help you forget about your start menu, your desktop icons, and your file manager. Launchy indexes and launches your applications, documents, project files, folders, and bookmarks with just a few keystrokes!
GDuplicateFinder - A FREE Groovy way to find file duplicates!
Unlike other duplicate finders such as Easy Duplicate File Finder, Auslogics Duplicate File Finder, MindGems Fast Duplicate File Finder, Duplicate Cleaner, DupFiles and others, GDuplicateFinder is a FREE cross-platform application, with the ability to search among not just local files, but files on the network, such as a Windows or a Linux share using VFS library. Taking advantage of Groovy facilities and GPars power to process in parallel, GDuplicateFinder will help you get rid of those duplicates you always wanted to dispose in an easy and friendly way. Looking for translators to translate the app! If you'd like to help me, just send me an e-mail to firstname.lastname@example.org. Thanks in advance If you want to help me continue improving this app, donate some money through paypal! https://www.paypal.com/cgi-bin/webscr?cmd=_s-xclick&hosted_button_id=fezuqqg9t6j6y
DuMP3 is a duplicate and similar file finder.
DuMP3 is a duplicate and similar file finder. It finds exact duplicate binaries by hash, similar text files by substring content, images (JPG, BMP, GIF, PNG, etc) by color and audio files (MP3, WAV, OGG, etc) by wave data. Future: fonts, video.
Find, select, delete empty folders. Use the ignore list and others.
Empty Directories Finder expires empty directories and allows you to conveniently select the required directories before deleting.
Wilma is a program for quickly finding text lurking in the files on your computer. It does this by creating an index of what words are in which files, which allows it to later find files containing a given word or set of words almost instantaneously.
Shell history suggest box - easily view, navigate, search your history
Are you looking for a command that you used recently? Do you want to avoid the need to write long commands over and over again despite you used them recently? Are you looking for a tool that is able to manage your favorite commands? HSTR is a command line utility that brings improved Bash command completion from the history. It aims to make completion easier and more efficient than Ctrl-r. Apart to the completion, history can be managed (you can remove commands that e.g. contain sensitive information like passwords) and bookmark your favorite commands.
JavaTB is a Java ToolBox that goes beyond what operating systems provide for file management, networking, system monitoring and many more functions.
Useful console application to search for largest files on file systems
sfbf (Search For Big Files) is a useful console application to search for largest files on file systems. It brings features such as : - Fast file search to locate largest files - Configurable search depth - Various output formats (txt, json, xml, html, csv) - Regular expression matching This project is licensed under the WTFPL (Do What The Fuck You Want To Public License, Version 2) Copyright © 2017 spypunk email@example.com This work is free. You can redistribute it and/or modify it under the terms of the Do What The Fuck You Want To Public License, Version 2, as published by Sam Hocevar. See the COPYING file for more details.
This project aims to create an OS X and Windows XP desktop application that will extract relevant information from your computer as you perform everyday tasks such as reading emails or chatting on instant messenger clients.
Non indexing file search tool, able to make complex requests, with an intuitive GUI. The goal is to replace the obnoxious and limited Search feature of WinXP by something usable (hence the name).
GUILocate is a graphical frontend for UNIX's locate command which was started as a small Obj-C/Cocoa training app.
A simple full text search tool that finds files matching a search expression in a directory tree.
Image Search Application
Meta Desktop is a user-focussed and backwards-compatible desktop file viewing system utilising enhanced metadata and user-defined 'smartness'. Core technologies are machine-written faceted classification and user-written folksonomic labeling.
A metadata-based file manager. Current file managers force you to rely on your filesystem hierarchy to organise your files. MetaLister liberates you from this restrictive system and allows you to use metadata for all of your organisational needs.
OOSearch is a full text search program for OpenOffice.org files. It opens all OpenOffice.org files in a specified directory or volume and searches for a given keyword. The found files can be opened via OOSearch directly.
Tool to find symbols in Library or Executable
This tool is handcrafted for developer to find symbols listed inside Library and Executables. Upgrading for demangling support.
Plait (pronounced "play") is a command-line jukebox and music player front-end. It understands brief queries that pick a single song, mix queries that combine works from multiple artists, and stream queries that find Shoutcast radio streams.
ServicemarX allows you to easily discover, bookmark, and share network services. It extends Bonjour (formerly known as Rendezvous) by expanding its scope Internet-wide. ServicemarX also enables Tiger's Wide Area capabilities. (full source in CVS below)