Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
Building a small bundle for MacOS X 10.2 in order to support menu extras in the same way they were supported in MacOS X 10.1
Parse formatted man pages and man page source from most flavors of UNIX. Convert to HTML, ASCII, TkMan, DocBook, and other formats.
An nmap output parser for scan data using PERL. Nmap Parser is a PERL module that makes developing security and audit tools using nmap and PERL easier. nmap is one of the best security scanners.
A simple but expressive job scheduler that allows you to chain jobs/tasks and create time dependencies. Uses text config files to specify task dependencies. Now comes with a built-in RESTful web service. Support for multiple machines coming soon.
iROS is a meta-operating system for technology-rich "interactive rooms". The core components (Event Heap, DataHeap, iCrafter) provide communication, data storage, and service management for an iRoom.
NFS-Wing is an Proposed File Sharing Mechanism on an single server based environment. Clients interact with the Server for NFS Protocol operations. This is an two tier archietecture where in Remotely added content will reflect in the NFS Filesystem.
MOVED TO: http://gnp.github.com/psh/
PLEASE NOTE: PLEASE NOTE: Development of Perl Shell has moved to GitHub: http://gnp.github.com/psh/ See you on the other side of the jump...
This is an XML-RPC client implementation for the popular REALbasic programming environment.
Spy is a Mac OS X menu extra displaying inportant info about your computer (CPU, Network, Disk and Memory usage)
Values-based Document Analysis: I want to take some rudimentary Document Analysis work that I have done and make it more sophisticated and to use it to analyze (at least) all of the docuemnts of the web for (human) values priorities. The project woul
Zoidberg (a.k.a. zoid) provides a modular Perl shell written, configured, and operated entirely in Perl. It aspires to be a fully operational login shell with all the features one normally expects. !! RELEASES NO LONGER THROUGH SF !!
Massrename is general purpose utility for batch-renaming all files of a suffix to a different suffix. eg: renaming all *.txt files in a directory to *.doc. Also supports renaming a string within a file with the --within argument.
rsback makes rotating backups using the common rsync program combined with hard-link copies on Unix-based backup hosts. This results in a fast and disk space saving backup technique.
xNamer, a flexible multiple file-renamer. Supports Perl regular expressions for advanced file selection and filename transformations. Cross platform GUI. MS Windows integration.