Showing 5 open source projects for "xray-core"

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  • 1
    gsasnp2

    gsasnp2

    PubMed ID: 29562348 / DOI: 10.1093/nar/gky175

    * GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data...
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  • 2
    SWire

    SWire

    A Stata plugin for connecting Stata with other software

    SWire is a software interface enabling us to query Stata for the executing of basic operations like reading or writing data. The core of SWire is a Java plugin which functions as a server and it can be queried by using the HTTP protocol. SWire is in essence a wrapper around the Stata-Java API and all the functions relating to this API can, therefore, be externally called by clients. SWire can be interrogated on a local network and it accepts AJAX queries, thus enabling the development of web applications which provide the user with graphical user interfaces. ...
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  • 3
    VBS for Research on the Internet

    VBS for Research on the Internet

    Welcome to the Volunteer-Based System for Research on the Internet!

    ...This information can be used for: - obtaining the knowledge which applications are most frequently used in the network - providing the users some basic statistics about their Internet connection usage (for example for which kinds of applications their connection is used the most) - creating scientific profiles of traffic generated by different applications or different groups of applications - creating a traffic generator, to imitate traffic generated by particular applications, or to imitate the real traffic in the network - implementing smart assessment of QoS in the network at the users' level and in the core of the network - obtaining precise data needed to train Machine Learning Algorithms - many more cases :-)
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  • 4

    Corbata

    CORe microBiome Analysis Tools

    Corbata is a set of statistical tools that can be used to analyze the core microbiome across a set of samples.
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  • 5

    GENIE (GEne-geNe IntEraction)

    GPU based Parallel Gene-Gene Interaction Analysis

    ...Most of the latest Central Processing Units (CPUs) have multiple cores, whereas Graphics Processing Units (GPUs) also have hundreds of cores and have been recently used to implement faster scientific software. However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic interaction analysis for binary traits. Here we present a novel software package GENIE, which utilizes the power of multiple GPU or CPU processor cores to parallelize the interaction analysis. Citation: Chikkagoudar, S., Wang, K., & Li, M. (2011). GENIE: a software package for gene-gene interaction analysis in genetic association studies using multiple GPU or CPU cores. ...
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