Showing 15 open source projects for "set"

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  • 1
    GIT quick statistics

    GIT quick statistics

    An efficient way to access various statistics in git repository

    ...For those who prefer to utilize command-line options, git-quick-stats also has a non-interactive mode supporting both short and long options. You can change to the legacy color scheme by toggling the variable _MENU_THEME between default and legacy. You can set variable _GIT_LIMIT for limited output. It will affect the "changelogs" and "branch tree" options. You can also exclude files from the stats. Note that it works with any alphanumeric, glob, or regex that git respects.
    Downloads: 3 This Week
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  • 2
    stkpp

    stkpp

    C++ Statistical ToolKit

    ...Some functionalities provided by the library are available in the R environment as R functions (http://cran.at.r-project.org/web/packages/rtkore/index.html). At a convenience, we propose the source packages on sourceforge. The library offers a dense set of (mostly) template classes in C++ and is suitable for projects ranging from small one-off projects to complete data mining application suites.
    Downloads: 0 This Week
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  • 3
    The Simplest Manual Counter

    The Simplest Manual Counter

    Manual counter with the keyboard or the mouse on images

    The only open source counter to count any items the simplest and easiest way with the keyboard, or the mouse specifically on images. After associating a key to each item, or a predefined graphical symbol for images, pressing the key or clicking on the image increments its associated counter, and displays (for the images) the symbol at the mouse's pointer location. Such a project is so simple a child could use it!
    Downloads: 3 This Week
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  • 4

    MAGeCK

    Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout

    Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. We thank the support...
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    Downloads: 91 This Week
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  • 5
    gsasnp2

    gsasnp2

    PubMed ID: 29562348 / DOI: 10.1093/nar/gky175

    * GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data...
    Downloads: 0 This Week
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  • 6
    Matlab Toolbox 'Measures of Effect Size'
    A set of Matlab functions which compute effect size statistics and (exact) confidence intervals for a wide range of data analysis situations, including two-sample-, oneway-, twoway- and contrast analyses as well as categorical data in tables.
    Downloads: 0 This Week
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  • 7

    Corbata

    CORe microBiome Analysis Tools

    Corbata is a set of statistical tools that can be used to analyze the core microbiome across a set of samples.
    Downloads: 0 This Week
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  • 8
    msp

    msp

    mathSuite Speed & Matrix Stream Processor

    This program is fundamentally a short-sized version of my mathSuite program: https://sourceforge.net/projects/mathsuite/ It includes all the functionalities of MSCenv (mathSuite Calculus Environment), such as inline variables and functions (mainly thanks to ExprEval), which you can use to perform expensive complex computations and store their results into runtime variables. You can perform also every Linear Algebra Operations included in mathSuite with new optimizations.
    Downloads: 0 This Week
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  • 9
    mathSuite

    mathSuite

    Powerful Calculus Environment and Matrices Handling Engine

    mathSuite is a very powerful Mathematical Suite which deals principally with complex algebric and geometric operations. It is powered by the fabulous ExprEval C Parser. The main purpose of this project is fast math-oriented algorithm virtualization, with an optimized direct text interface. Also it gives you a very powerful and fast Calculus Environment which let you handle easily interchangeable variable lists, matrices, LOGS and Settings Layouts with optimized Items Lists Managing Engine....
    Downloads: 0 This Week
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  • 10
    MRA

    MRA

    A general recommender system with basic models and MRA

    Multi-categorization Recommendation Adjusting (MRA) is to optimize the results of recommendation based on traditional(basic) recommendation models, through introducing objective category information and taking use of the feature that users always get the habits of preferring certain categories. Besides this, there are two advantages of this improved model: 1) it can be easily applied to any kind of existing recommendation models. And 2) a controller is set in this improved model to provide controllable adjustment range, which thereby makes it possible to provide optional modes of recommendation aiming different kinds of users.
    Downloads: 0 This Week
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  • 11

    FreDec

    Parallelized FREquency DEComposer algorithm

    ...After selection of the initial frequency candidates, the algorithm passes through all their possible combinations and estimates their multi-frequency statistical significance. In the end, it prints out the set of largest frequency tuples that were still found significant. The GPU computing is implemented through CUDA and brings a significant performance increase. It is still possible to run FreDec solely on CPU, if no suitable GPU device is available in the system. See the details of the underlying theory in Baluev 2013, MNRAS, V. 436, P. 807 The description of the algorithm itself can be found in arXiv:1309.0100. ...
    Downloads: 0 This Week
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  • 12

    Black Hole Cortex

    Sphere surface layers of visual cortex approach maximum info density

    Near the surface (even horizon) of a black hole, there is maximum information density in units of squared plancks (and some translation to qubits). Similarly, our imagination is the set of all possible things we can draw onto our most dense layer of visual cortex in electricity patterns. Bigger layers have more neurons to handle those possibilities. A Black Hole Cortex is a kind of visual cortex that has density of neuron layers similar to density at various radius from a black hole. What we think our eyes see, the imagination, is the densest and smallest layer. ...
    Downloads: 0 This Week
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  • 13
    ShiVaSmiles

    ShiVaSmiles

    A slick interface to see various scale analysis algorithms in action.

    The Shape Visualizer is intented to be an exploratory/educational tool making it quick and easy to see how various mathematical methods perform in analysing and selecting the various patterns present on an image. The main website is built as a wiki gathering info and examples on the various implemented algorithms. The combination of the application and its wiki intend to constitute a nice little pedagogic toolkit for multiscale analysis. Feel free to contribute code or wiki content !
    Downloads: 0 This Week
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  • 14
    Scale Assistant is an OpenOffice.org extension designed to give OOo Calc additional power that meet some needs of social sciences researcher.
    Downloads: 0 This Week
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  • 15
    FastPval is multiple stage p-value computing software that computes empirical p-values from a large set of permutated/resampled background data.
    Downloads: 0 This Week
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