Showing 48 open source projects for "multi-system"

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  • 1

    Hrothgar Parallel LM/MCMC Minimizer

    A versatile MCMC and downhill optimization engine

    Hrothgar is a parallel minimizer and Markov Chain Monte Carlo generator by Andisheh Mahdavi of San Francisco State University. It has been used to solve optimization problems in astrophysics (galaxy cluster mass profiles) as well as in experimental particle physics (hadronic tau decays). It is probably adaptable enough to be applied to your merit function if you can write it in C.
    Downloads: 0 This Week
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  • 2

    PhEq_bootstrap

    FDA's f2 computation with bootstrap technique

    This program was developed as a help in establishing pharmaceutical equivalence by use of FDA f2 coefficient. It was designed to help with f2 computation in cases when intra- and inter-batch variability is large, namely RSD>10%. The use of statistical bootstrap technique allows to implement confidence interval (CI) into the f2 coefficients resulting in overcoming of their major drawback in the original metrics. The algorithm provides possible “worst case scenario” of f2 values, thus...
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    Downloads: 43 This Week
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  • 3
    KeplerDB

    KeplerDB

    Timeseries databases management system

    KeplerDB is a temporal database to store time/value entries where the type of value could be integer, float/double, boolean and string. KeplerDB is dedicated to be scalable and to create clusters of server allowing the user to analyse and store massing amount of data to monitor systems like computers, clusters, building and captors or financial systems like markets and accounts. The user can use KeplerDB to make data analysis on enormous amount of data (statistics and modelling).
    Downloads: 0 This Week
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  • 4
    SalStat is a small application for statistical analysis emphasising the sciences and social sciences (particularly Psychology). The project is designed around the user interface which has been designed to be simple to use. Think SPSS, but better!
    Downloads: 6 This Week
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    datadensityplot

    Creates a data density plot of a 2 dimensional data distribution.

    Shows the data density of a 2 dimensional distribution. The problem of showing data density visually is not mathematically well defined, and there are several methods. The program uses sum of reciprocal squared distance to calculate density at each point, with a smear factor to prevent points going to infinity. The smear factor also controls the amount of clustering. There are several options for colour output. Input is via a csv (comma-separated values) file. Now there's a nice GUI...
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  • 6
    Soothsayer

    Soothsayer

    Capacity exhaustion prediction from RRD files

    Predict if storage utilised will reach capacity within defined period (maximum 5 years), using recent historical data contained within RRD files (maximum -1 year). Produces HTML (or partial HTML) and, more importanly, a PNG RRD Graph showing the prediction and, should the capacity be reached, an annotation indicating when. Optionally email out exception notices.
    Downloads: 1 This Week
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  • 7

    GENIE (GEne-geNe IntEraction)

    GPU based Parallel Gene-Gene Interaction Analysis

    ...Most of the latest Central Processing Units (CPUs) have multiple cores, whereas Graphics Processing Units (GPUs) also have hundreds of cores and have been recently used to implement faster scientific software. However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic interaction analysis for binary traits. Here we present a novel software package GENIE, which utilizes the power of multiple GPU or CPU processor cores to parallelize the interaction analysis. Citation: Chikkagoudar, S., Wang, K., & Li, M. (2011). GENIE: a software package for gene-gene interaction analysis in genetic association studies using multiple GPU or CPU cores. ...
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  • 8

    LQFB-analyser

    A lqfb delegation analyser. A 3d directed weighted multi graph.

    A rich client to analyse data from a liquid-feedback (http://liquidfeedback.org/) instance, for now it's a 3d graph explorer to inspect the delegations. It's an application based on the eclipse platform (indigo). To be precise its a directed weighted multi graph browser in 3d. Find out more in the wiki https://sourceforge.net/p/lqfbanalyser/wiki/Home/ . Generated reports https://sourceforge.net/p/lqfbanalyser/wiki/generated%20lqfb%20reports/ .
    Downloads: 0 This Week
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  • 9

    FreDec

    Parallelized FREquency DEComposer algorithm

    ...The algorithm analyses all suspicious frequencies, including the ones that look like an alias at a glance, but may become preferable later. After selection of the initial frequency candidates, the algorithm passes through all their possible combinations and estimates their multi-frequency statistical significance. In the end, it prints out the set of largest frequency tuples that were still found significant. The GPU computing is implemented through CUDA and brings a significant performance increase. It is still possible to run FreDec solely on CPU, if no suitable GPU device is available in the system. ...
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  • 10
    EnvStats

    EnvStats

    An R Package for Environmental Statistics

    ...EnvStats brings the major environmental statistical methods found in the literature and regulatory guidance documents into one statistical package, along with an extensive hypertext help system that explains what these methods do, how to use these methods, and where to find them in the environmental statistics literature. Also included are numerous built-in data sets from regulatory guidance documents and the environmental statistics literature. EnvStats combined with other R packages (e.g., for spatial analysis) provides the environmental scientist, statistician, researcher, and technician with tools to “get the job done!”
    Downloads: 0 This Week
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  • 11
    DeDAY

    DeDAY

    MLE survival analysis: Gompertz, Weibull, Logistic and mixed morality.

    ...DeDAY supports both interval-censored data and exact event-time data. Using MLE (Maximum Likelihood Estimate), DeDAY fits statistic model to the data. DeDAY also calculates the variances and the multi-dimensional confidence limits of model parameters. DeDAY is free for academic users.
    Downloads: 0 This Week
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  • 12

    abc-sde

    approximate Bayesian computation for stochastic differential equations

    ...It performs approximate Bayesian computation for stochastic models having latent dynamics defined by stochastic differential equations (SDEs) and not limited to the "state-space" modelling framework. Both one- and multi-dimensional SDE systems are supported and partially observed systems are easily accommodated. Variance components for the "measurement error" affecting the data/observations can be estimated. A 50-pages Reference Manual is provided with two case-studies implemented and discussed. The methodology is based on the research article available at http://arxiv.org/abs/1204.5459 Author's research page is http://www.maths.lth.se/matstat/staff/umberto/
    Downloads: 2 This Week
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  • 13
    R packages supporting parallel computing.
    Downloads: 0 This Week
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  • 14

    knowceans

    Utility classes from maps to search engine to random samplers

    Collection of several multi-purpose Java libraries. --- knowceans-tools = collection of Java utility classes. --- Highlights: --- org.knowceans.util: IndexQuickSort, TableList: apply order of one array/list to others +++ Vectors, ArrayUtils: array convenience +++ RandomSamplers, CokusRandom, ArmSampler, Densities: random sampling and distributions +++ Arguments: command line parser +++ StopWatch, Which, ExternalProcess: runtime stuff +++ ParallelFor: OpenMP workalike +++ PatternString, NamedGroupRegex: regex convenience --- org.knowceans.corpus: CorpusSearcher: full-text search engine +++ LabelNumCorpus: svmlight corpus storage and filtering +++ NIPS corpus with text, authors, labels and citations --- org.knowceans.map: InvertibleHashMultiMap, BijectiveHashMap: implement n:m and 1:1 relations. --- Other libs: knowceans-arms = port of the Adaptive Rejection Metropolis Sampler (ARMS) for arbitrary distributions +++ lda-j = port of lda-c, implementing Latent Dirichlet Allocation (LDA)
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  • 15
    T3S Tool

    T3S Tool

    Learning Stochastic Discrete Event Systems

    Stochastic discrete event system analysis and verification are essential in order to ensure reliability in such systems. However, models that cannot be constructed with an hand-made process need to be learned. Thus, the SDES toolbox proposes an automated solution that is embedded in Matlab to learning and analisis generalized semi-Markov processes.
    Downloads: 0 This Week
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  • 16
    An application built onto the Open Table Explorer engine for the acquisition and analysis of home energy consumption and solar energy production.Moved to github as Open Table Explorer
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  • 17
    KinetDS is a software for curve fitting particularly designed for kinetic (mechanistic and empirical) description of a substance dissolution from solid state. It was primarily designed for handling pharmaceutical dissolution tests
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    Downloads: 14 This Week
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  • 18
    LCMStats - An R package
    An R package for detailed inspection and analysis of LCMS data. An R package developed by Sukhdeep Singh at Department of Surgery and Cancer, Imperial College London,UK.
    Downloads: 0 This Week
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  • 19
    Stand-alone software tool for the interactive CE analysis of microarray data. The software is a user-friendly and allows on-the-fly study of CE
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  • 20
    This project aims to provide open source software implementing the Wedge algorithm for the estimation of parameters in dynamical systems models. This project also seeks to create tutorials and resources for those using Wedge.
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  • 21
    This program generates customizable hyper-surfaces (multi-dimensional input and output) and samples data from them to be used further as benchmark for response surface modeling tasks or optimization algorithms.
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  • 22
    Math.NET aims to provide a self contained clean framework for symbolic mathematical (Computer Algebra System) and numerical/scientific computations, including a parser and support for linear algebra, complex differential analysis, system solving and more
    Downloads: 0 This Week
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  • 23

    Math Calculator

    Unix/Linux math calculator

    An easy, small and handy math calculator for Unix/Linux systems. It can calculate easy and complex mathematical expressions passed as command line arguments.
    Downloads: 0 This Week
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