Showing 70 open source projects for "android version 5"

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  • 1
    gsasnp2

    gsasnp2

    PubMed ID: 29562348 / DOI: 10.1093/nar/gky175

    * GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data...
    Downloads: 6 This Week
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  • 2
    PaCal
    ProbAbilistic CALculator - a package for computing with probability distributions
    Downloads: 0 This Week
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  • 3

    JDistlib

    Java library of statistical distribution

    This project moved to Github: https://robbyjo.github.io/JDistlib/ A Java package that provides routines for various statistical distributions. Based on R version 2.14.1 (continuously updated; current as of R v4.6.1). The major difference is that JDistlib is thread safe. The library contains the density (pdf), cumulative (cdf), quantile, and random number generator (RNG) routines of the following distributions: Ansari, Beta, Binomial, Cauchy, Chi square, Exponential, Fisher's F, Gamma,...
    Downloads: 8 This Week
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  • 4
    Epidat

    Epidat

    Statistical data analysis

    Programa multiplataforma de libre distribución para el análisis estadístico y epidemiológico de datos. Free distribution cross-platform program for statistical and epidemiological analysis of data. Sitio web: http://www.sergas.es/Saude-publica/EPIDAT Souceforge: https://sourceforge.net/projects/epidat/ Wikipedia: https://es.wikipedia.org/wiki/Epidat
    Downloads: 15 This Week
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  • 5
    SWire

    SWire

    A Stata plugin for connecting Stata with other software

    SWire is a software interface enabling us to query Stata for the executing of basic operations like reading or writing data. The core of SWire is a Java plugin which functions as a server and it can be queried by using the HTTP protocol. SWire is in essence a wrapper around the Stata-Java API and all the functions relating to this API can, therefore, be externally called by clients. SWire can be interrogated on a local network and it accepts AJAX queries, thus enabling the development of...
    Downloads: 0 This Week
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  • 6
    All future developments will be implemented in the new MATLAB toolbox SciXMiner, please visit https://sourceforge.net/projects/scixminer/ to download the newest version. The former Matlab toolbox Gait-CAD was designed for the visualization and analysis of time series and features with a special focus to data mining problems including classification, regression, and clustering.
    Downloads: 0 This Week
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  • 7
    JStats

    JStats

    JStats is a Java application/applet for statistical testing.

    JStats is a small but powerful Java application/applet for conducting statistical tests. The following tests are supported: * Parametric tests: T-test, ANOVA, Repeated Measures ANOVA * Non-parametric tests: Wilcoxon Rank-Sum, Wilcoxon Signed-Ranks, Kruskal-Wallis, Friedman * Check if datasets are normally distributed: Jarque-Bera, Shapiro-Wilk * Check if datasets have equal variances: F-test, Bartlett's test, John, Nagao and Sugiura's test * Correlation: Correlation coefficient,...
    Downloads: 1 This Week
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  • 8
    Community Detection Modularity Suite

    Community Detection Modularity Suite

    Suite of community detection algorithms based on Modularity

    - MixtureModel_v1r1: overlapping community algorithm [3], which includes novel partition density and fuzzy modularity metrics. - OpenMP versions of algorithms in [1] are available to download. - Main suite containing three community detection algorithms based on the Modularity measure containing: Geodesic and Random Walk edge Betweenness [1] and Spectral Modularity [2]. Collaborator: Theologos Kotsos. [1] M. Newman & M. Girvan, Physical Review, E 69 (026113), 2004. [2] M....
    Downloads: 0 This Week
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  • 9

    runjags

    The 'runjags' R package and standalone JAGS extension module

    This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A...
    Downloads: 1 This Week
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  • 10

    minepy

    Maximal Information-based Nonparametric Exploration

    The minepy homepage has moved to http://minepy.readthedocs.io. The download page is now at https://github.com/minepy/minepy/releases.
    Downloads: 2 This Week
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  • 11
    hSDM

    hSDM

    R package for hierarchical species distribution models

    hSDM is an R package for hierarchical species distribution models. Such models allows interpreting the observations (occurrence and abundance of a species) as a result of several hierarchical processes including ecological processes (habitat suitability, spatial dependence and anthropogenic disturbance) and observation processes (species detectability). Hierarchical species distribution models are essential for accurately characterizing the environmental response of species, predicting their...
    Downloads: 0 This Week
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  • 12

    ASEP simulation library

    Simulation library for SSEP, ASEP or TASEP simulations

    ASEP simulation library is specialized for simulations of Asymmetric Simple Exclusion Processes (ASEP) and its mutations like SSEP or TASEP based on a graph. It is consisted of agents, models, timers and graphs that forms united modelling enviroment ready for computer cluster use - all based on Zarja library.
    Downloads: 0 This Week
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  • 13

    GADfit

    Global nonlinear optimization with automatic differentiation

    NOTE: Development continued at GitHub! Current version is higher than 1.2.0. GADfit is a Fortran implementation of global nonlinear curve fitting, based on a modified Levenberg-Marquardt algorithm. Global fitting refers to fitting many datasets simultaneously with some parameters shared among the datasets. The fitting procedure is very fast and accurate thanks to the use of automatic differentiation. The model curves (fitting functions) can be of essentially arbitrary complexity. This...
    Downloads: 0 This Week
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  • 14

    Kontinuum Calculator

    Calculate various aspects of the Kontinuum RPG system.

    Kontinuum is a calculator program that enables the user to calculate all probabilistic aspects of the Kontinuum RPG system, especially the dice rules.
    Downloads: 0 This Week
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  • 15
    ARNU

    ARNU

    Arredondamento de Números

    Sistema de Apoio Didático Profissional. ARNU - Arredondamento de Números. O aplicativo ARNU tem por objetivo auxiliar na resolução de cálculos de arredondamento matemático, abordados de forma técnica, entregando ao usuário um resultado didático e objetivo, o motivo e as normas utilizadas.
    Downloads: 0 This Week
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  • 16
    msp

    msp

    mathSuite Speed & Matrix Stream Processor

    This program is fundamentally a short-sized version of my mathSuite program: https://sourceforge.net/projects/mathsuite/ It includes all the functionalities of MSCenv (mathSuite Calculus Environment), such as inline variables and functions (mainly thanks to ExprEval), which you can use to perform expensive complex computations and store their results into runtime variables. You can perform also every Linear Algebra Operations included in mathSuite with new optimizations.
    Downloads: 2 This Week
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  • 17
    NORTEM

    NORTEM

    Normalizador de Tempo

    Sistema de Apoio Didático Profissional. NORTEM - Normalizador de Tempo. O aplicativo NORTEM tem por objetivo auxiliar na resolução de cálculos de conversão de tempo, entregando ao usuário um resultado didático e objetivo, mostrando passo a passo o desenvolvimento do problema.
    Downloads: 0 This Week
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  • 18

    Hrothgar Parallel LM/MCMC Minimizer

    A versatile MCMC and downhill optimization engine

    Hrothgar is a parallel minimizer and Markov Chain Monte Carlo generator by Andisheh Mahdavi of San Francisco State University. It has been used to solve optimization problems in astrophysics (galaxy cluster mass profiles) as well as in experimental particle physics (hadronic tau decays). It is probably adaptable enough to be applied to your merit function if you can write it in C.
    Downloads: 0 This Week
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  • 19

    PhEq_bootstrap

    FDA's f2 computation with bootstrap technique

    This program was developed as a help in establishing pharmaceutical equivalence by use of FDA f2 coefficient. It was designed to help with f2 computation in cases when intra- and inter-batch variability is large, namely RSD>10%. The use of statistical bootstrap technique allows to implement confidence interval (CI) into the f2 coefficients resulting in overcoming of their major drawback in the original metrics. The algorithm provides possible “worst case scenario” of f2 values, thus...
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    Downloads: 24 This Week
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  • 20
    coalescent

    coalescent

    Software tool for Research in Computational Population Genetics

    Development of exact and approximate methods (Importance Sampling and MCMC based) for computing likelihoods under the standard population genetic models of mutation,migration & recombination. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/COALESCENT
    Downloads: 0 This Week
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  • 21
    phcfM

    phcfM

    R package for modelling anthropogenic deforestation

    phcfM is an R package for modelling anthropogenic deforestation. It was named after the REDD+ pilot-project 'programme holistique de conservation des forêts à Madagascar'. phcfM includes two main functions: (i) demography(), to model the population growth with time in a hierarchical Bayesian framework using population census data and Gaussian linear mixed models and (ii) deforestation(), to model the deforestation process in a hierarchical Bayesian framework using land-cover change data and...
    Downloads: 0 This Week
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  • 22
    Statcato
    Statcato is a Java software application for elementary statistics. Its features include data and graph generation, probability distributions, descriptive statistics, confidence intervals, hypothesis tests, correlation, regression, and analysis of var
    Downloads: 3 This Week
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  • 23
    Soothsayer

    Soothsayer

    Capacity exhaustion prediction from RRD files

    Predict if storage utilised will reach capacity within defined period (maximum 5 years), using recent historical data contained within RRD files (maximum -1 year). Produces HTML (or partial HTML) and, more importanly, a PNG RRD Graph showing the prediction and, should the capacity be reached, an annotation indicating when. Optionally email out exception notices.
    Downloads: 0 This Week
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  • 24
    IterInt is a numerical integration package that implements iterated numerical integration methods. Iterated methods can be used to compute low dimensional (less than ten, for example) integration problems to get very accurate results.
    Downloads: 0 This Week
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  • 25
    EnvStats

    EnvStats

    An R Package for Environmental Statistics

    EnvStats is an R package for environmental statistics. It is the open-source successor to the commercial module for S-Plus© called "EnvironmentalStats for S-Plus", which was first released in April, 1997. The EnvStats package, along with the R software environment, provides comprehensive and powerful software for environmental data analysis. EnvStats brings the major environmental statistical methods found in the literature and regulatory guidance documents into one statistical package,...
    Downloads: 0 This Week
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