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...MobaXterm provides all the important remote network tools (SSH, X11, RDP, VNC, FTP, MOSH, ...) and Unix commands (bash, ls, cat, sed, grep, awk, rsync, ...) to Windows desktop, in a single portable exe file which works out of the box There are many advantages of having an All-In-One network application for your remote tasks, e.g. when you use SSH to connect to a remote server, a graphical SFTP browser will automatically pop up in order to directly edit your remote files. Your remote applications will also display seamlessly on your Windows desktop using the embedded X server. You can download and use MobaXterm Home Edition for free.

...The focus is on running tunnels inside tunnels. That one has to jump through several machines. Please see the wiki pages for documentation. https://sourceforge.net/p/doffensshtunnel/wiki/Home/

Please use https://code.google.com/p/ganymed-ssh-2/ , as this current project is not getting the attention it should and therefore should be considered as 'parked'. Orion SSH for Java is a library which implements the SSH-2 protocol in pure Java. This is the new name, and home, for Trilead SSH (formerly Ganymed SSH2).