JPerfAnal is a performance analysis tool for the Java 2 Platform. It performs post-run analysis of data collected by Sun's hprof profiler, cooks the data in useful ways, and displays call graphs and profiling information in an interactive GUI.
dom4jb is a XML-Data-Binding library for the dynamic mapping of JavaBean-based object graphs into a tree-based XML representation (i.e. DOM or XPath-Models), so that these can be transformed by means of XSLT. It is completly written in Java.
An Eclipse plug-in and KDE application to visually and interactively explore arbitrary graphs (collections of nodes and edges) specified in the Graph eXchange Language (GXL).
The project ASHWOOD has a goal to create an open source Java implementation
of graphs, graph related algorithms, and other useful concepts and algorithms
of CS, Applied Mathematics, and their applications.
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JDigraph is a Java library for representing and working with directed graphs and paths hosted at http://jdigraph.dev.java.net . The API is patterned after the Java collections API.
ThunderGraph is another java charting library intended to draw 2D graphs. Additionally, it contains a package that presents a live component implementing zoomable, scrollable and 'hintable' graph. Written for JDK 1.1+, it may be used in MS IE applets.
The jload framework enables developers to create repeatable load test cases. The framework will then execute these cases and generate reports and graphs showing the execution times and characteristics.
This module provides a Perl interface to layout and image generation of
directed and undirected graphs in a variety of formats (PostScript,
PNG, etc.) using the "dot" and "neato" programs from the GraphViz
project (http://www.graphviz.org/).
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The Graph Implementation and Representation Libraries, or GIRLs, aim to be all-purpose libraries for solving graph theory problems. ie, shortest paths, matching, cycles, connectedness, creating 'random' graphs, etc...
A minimalistic CASE tool that will allow end-users to analyze their graphs (plain-old graphs, UML diagrams, ERDs, etc.) by applying various graph theory functions to them (such as a shortest path algorithm or a spanning tree algorithm.)
PNGraph is a GPL group of classes to develop graphs using PHP, that is intended to be easier to use then PEAR::Graph, and pretty simple to be extended and implemented.
SVN Statistika is a server-side application for generating reports (graphs, trees, tables) from subversion repository. Client-side GUI application is also avaible and is used to control the server-side.