Search Results for "research" - Page 27
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Showing 2882 open source projects for "research"
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An open-source implementation of our network-based target deconvolution approach, named target addiction score (TAS). License: The TAS R-package is made available under the terms of the GNU General Public License, which means that the source code is freely available for use within other software, but if you alter the code and distribute it, you must make the new source code freely available as well. This software is distributed in the hope that it will be useful, but WITHOUT ANY...
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ABTestingGateway
Identify and bypass network-level A/B testing and gateway behavior
ABTestingGateway is a tool developed by China's National Security Research Institute (CNSRE) to identify and bypass network-level A/B testing and gateway behavior often used in censorship systems. It performs dynamic analysis and comparison of network paths to detect content filtering and manipulation strategies employed by intermediate network devices. -
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Xtraitj
Pure Trait-based Programming on the Java Platform
Xtraitj is a programming language for pure trait-based programming. It is completely compatible and interoperable with the JAVA platform without reducing the flexibility of traits. Xtraitj is integrated in Eclipse (editor with all the standard tooling) and JDT. It is implemented in Xtext, relying also on Xbase. -
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Opt4J
Modular Java framework for meta-heuristic optimization
Opt4J is an open source Java-based framework for evolutionary computation. It contains a set of (multi-objective) optimization algorithms such as evolutionary algorithms (including SPEA2 and NSGA2), differential evolution, particle swarm optimization, and simulated annealing. The benchmarks that are included comprise ZDT, DTLZ, WFG, and the knapsack problem. The goal of Opt4J is to simplify the evolutionary optimization of user-defined problems as well as the implementation of arbitrary... -
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tGlue
Glue Libraries for Users as an Environment
A platform-independent environment to glue developed libraries (such as different quantum-chemistry libraries) together for research, education and further development. Git repository: https://gitlab.com/groups/tglue -
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JCLAL
A Java Class Library for Active Learning
...The full citation is: Oscar Reyes, Eduardo Pérez, María del Carmen Rodríguez-Hernández, Habib M. Fardoun, Sebastián Ventura. JCLAL: A Java Framework for Active Learning. Journal of Machine Learning Research, 17(95):1-5, 2016. -
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JavaCá&Lá
A Java Distributed Shared Memory Middleware
How can we easily develop applications for multicore or multicomputer architectures? We frequently use middlewares for that problem, but they are often complex and less productive. This way, at DECOM-UFOP, we have a middleware, named JavaCa&La or just JCL, to build portable and scalable solutions over many high performance computer architectures. Our middleware APIs is simple, intuitive and designed for young and senior programmers who don’t have high performance programming skills. Using... -
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FAST Simulations
An Open source Analysis and SImulation Toolbox for Fuel Cells
FAST is an Analysis and Simulation Toolbox (FAST) for Fuel Cells (FC) FAST-FC is the doctorate work of David B. Harvey and was developed with support from the U.S. DOE, Ballard, and Queen's University. Derivative works of FAST-FC include FC-APOLLO which is a forked branch of this project intended to capture the code state at the exit of the funded DOE project. FAST-FC is the open and active community branch. FAST-FC is developed and maintained by the original creator and... -
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QAdvancedItemViews
QAdvancedItemViews (QAIV) extends the capabilities of QTableView
QAdvancedItemViews (QAIV) extends the capabilities of the Qt classes QTableView and QSortFilterProxyModel. E.g. QAdvancedTableView supports multicolumn filtering and includes a header view alowing users to create, modify and delete filter. Additional utility classes provide proxy models for conditional decorations, groupings and a lot more. -
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pyhard2, control hardware from python
An object-oriented framework for the development of instrument drivers
pyhard2 is an object-oriented framework to help in the development of instrument drivers. pyhard2 is proposed as an alternative to LabVIEW. Emphasis is given on serial drivers but the framework can be used with any socket. The source also contains the implementation of a PID controller and a setpoint ramp generator. The instrument drivers may further be incorporated in a GUI, using, e.g. PyQt or PySide. Threading is automatically taken care of. Furthermore, generic GUI (called... -
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The Systems Biology Results Markup Language is a language describing data. Unlike flat data formats, SBRML allows describing the origin of the data as well. This project hosts a library and tools for using SBRML.
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PingPongPro
Find ping-pong signatures like a pro
...The resulting mRNA fragments induce the production of more piRNAs, thus reinforcing the anti-transposon response in a feed-forward loop called the "ping-pong cycle". A key question in ping-pong cycle research is identification of piRNAs which are amplified through the cycle. PingPongPro is a command-line tool for detecting ping-pong cycle activity in piRNA-Seq data. PingPongPro was developed at the Institute of Molecular Biology gGmbH in Mainz. -
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Development is now hosted at https://github.com/symphonytool/symphony
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CCKDM
Concern Mining
This is a tool for concern mining which uses a KDM model as input and the output is the same model with annotated concerns. It uses a Concern Library and a modified String Clustering K-means algorithm with Levenshtein metric to cluster the strings. -
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Mangrove TDS Library
A C++ Tool for the Fast Prototyping of Topological Data Structures
The Mangrove Topological Data Structure (Mangrove TDS) Library is a C++ template tool for the fast prototyping of topological data structures under the same API: - generic representation of any topological data structure, i.e., mangrove; - extensible through dynamic plugins at run-time; - agnostic wrt the representation in use; - any representation is supported without restrictions; - dimension-independent and multi-platform; - efficient representations of... -
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This project consists of various implementations of the Graphplan algorithm. At the moment we have two implementations of Graphplan: * Emplan - A C++ implementation for Linux, Windows and MacOS X * JavaGP - A Java implementation
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MSAProbs: Multiple Sequence Alignment
One of the most accurate multiple protein sequence aligners
MSAProbs is an open-source protein multiple sequence ailgnment algorithm, achieving the stastistically highest alignment accuracy on popular benchmarks: BALIBASE, PREFAB, SABMARK, OXBENCH, compared to ClustalW, MAFFT, MUSCLE, ProbCons and Probalign. -
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Source code and releases from 1.6.0 are also found there. The git and svn repositories here are outdated
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GAVS+
An open platform for the research of algorithmic game solving
...is an open-source tool which enables to visualize a broad spectrum of algorithmic games used in verification and synthesis, and offers a standard interface with utility functions to establish connection with engineering practice. It is developed by Department of Informatics (Unit 6), TU München. The tool is mainly is served for research and educational purposes. The software is released under the GNU General Public License (v3). A slightly outdated tutorial (in PDF) is included in the zip file. -
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Ptolemy is an extension of Java whose goal are to enable separation of crosscutting concerns, while retaining our ability to understand separated concerns modularly. It balances modularity and expressiveness for aspect-oriented software development.
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wxEcMath
Easy mathematics in wxWidgets
Tiny library written in C++/wxWidgets designed to manage mathematical objects : parser of expressions, plots, matrixes and complex numbers. Ansi and Unicode are supported. Documentation and rich samples are provided. Compiles with MSVC, BCC, GCC and Clang. Now on Git. -
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Primes
Calculate primes by using extremely fast sorting
This project considers the problem of calculating primes as a sorting problem. It includes the most efficient tree-based sorting algorithm that is possible and shows that finding a new prime can be done by sorting the differences between the previous primes in the right way. Unfortunately it has turned out that going this way is even more slowly than trying to find primes by brute force. So it can only be used as a test with heavy load for the sorting algorithm, which can be used for... -
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Genetic Programming Classifier is a distributed evolutionary data classification program. It uses the ensemble method implemented under a parallel co-evolutionary Genetic Programming technique.
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Jafaran
Fast and more random implementations of java.util.Random.
Jafaran (Java Fast Random) provides fast, and for some more random, implementations of java.util.Random, with additional nextXXX() methods, and methods to retrieve and restore state. The names of implementations contain "Conc" (for concurrent) if they are thread-safe and non-blocking, or "Seq" (for sequential) if they are not thread-safe. Also provides an implementation of Ziggurat algorithm (based on J. A. Doornik paper, 2005), used by nextGaussian() methods of the provided...
